Haloprofundus marisrubri str. SB9

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Haloferacaceae

Genus

Haloprofundus

Description

Haloprofundus marisrubri strain SB9 is a unique microorganism characterized by its single replicon and is cataloged under the accession number LOPU00000000.1. This bacterium is part of the larger group of halophilic Archaea, which thrive in highly saline environments. The singular replicon indicates that Haloprofundus marisrubri has a streamlined genetic structure, which may provide advantages in its extreme habitat, such as reduced energy expenditure during replication. The adaptation to high-salinity conditions suggests that this organism has developed specialized mechanisms to manage osmotic pressure, potentially involving compatible solutes or unique membrane structures that stabilize cellular functions in such environments. Biologically, the existence of Haloprofundus marisrubri in extreme saline settings contributes to our understanding of microbial life in harsh conditions. It highlights the diversity of adaptations that microorganisms have evolved to survive and thrive in environments that would be inhospitable to most life forms. Ecologically, the presence of such extremophiles can play a significant role in biogeochemical cycles in saline ecosystems, influencing nutrient availability and energy flow. This underlines the importance of studying such organisms to gain insights into microbial ecology and the potential for biotechnological applications in the future.

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyHaloferacaceae
GenusHaloprofundus
SpeciesHaloprofundus marisrubri
StrainSB9

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Haloprofundus marisrubri strain SB9 contig_9, whole genome shotgun

Gene Summary

Adenine Count

735786 bp

Thymine Count

736516 bp

Guanine Count

1223288 bp

Cytosine Count

1233967 bp

Genome Length

3929557 bp

Protein-coding Genes

3761 genes

Non-Coding Genes

51 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinAUR64_00150Not AvailablePositive32443 - 326286577.47
hypothetical proteinAUR64_00155Q8C165Positive32719 - 3408649122.1
pyruvate dehydrogenase (acetyl-transferring) e1 component subunit alphaAUR64_00160Q5HGZ1Positive34472 - 3554539895.2
2-oxoisovalerate dehydrogenaseAUR64_00165P21874Positive35545 - 3653736220.9
branched-chain alpha-keto acid dehydrogenase subunit e2AUR64_00170Q5HQ74Positive36541 - 3814256649.1
dihydrolipoyl dehydrogenaseAUR64_00175Q04829Positive38147 - 3957449679.2
hypothetical proteinAUR64_00180Not AvailablePositive39655 - 3995710852.9
phosphoglucosamine mutaseAUR64_00185Q68BJ6Positive40060 - 4142448615.7
phosphoribosyl-amp cyclohydrolaseAUR64_00195Q18DH0Negative42669 - 4302813250.1
peptidase a24AUR64_00200Q5UZH5Negative43078 - 4407936552.3

Displaying genes 31 – 40 of 3812 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

209 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002654-formylbenzenesulfonateC7H5O4SChemical structure of 4-formylbenzenesulfonateNot available
Average185.17Da
Monoisotopic184.991403395Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000401(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8Chemical structure of (S)-2-succinylamino-6-oxoheptanedioateNot available
Average286.218Da
Monoisotopic286.0579371Da
BASm00004283-oxoadipateC6H6O5Chemical structure of 3-oxoadipateNot available
Average158.11Da
Monoisotopic158.022620453Da

Displaying 1–10 of 209 metabolites

Health Effects

No health effects information available for this bacterium.