Rhodopseudomonas pseudopalustris

rodanaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Nitrobacteraceae

Genus

Rhodopseudomonas

Description

Rhodopseudomonas pseudopalustris is a Gram-negative, rod-shaped bacterium known for its anaerobic lifestyle. This organism thrives in environments devoid of oxygen, which is characteristic of its metabolic processes. R. pseudopalustris possesses flagella, enabling motility and facilitating its movement within its ecological niche. The bacterium has a single replicon, indicating a streamlined genomic organization that is typical for many prokaryotes. The genomic data for R. pseudopalustris can be accessed under the accession number FODT00000000.1, which provides a resource for researchers interested in studying its genetic makeup and functional capabilities. Rhodopseudomonas pseudopalustris exhibits a versatile metabolism, allowing it to utilize a variety of substrates for growth and energy. This adaptability may contribute to its ecological role in various habitats, including aquatic environments where it can participate in nutrient cycling and contribute to the overall microbial community dynamics. Understanding the specific characteristics of R. pseudopalustris can provide insights into its ecological functions, particularly in anaerobic conditions, where it may play a role in processes such as photosynthesis and nitrogen fixation.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyNitrobacteraceae
GenusRhodopseudomonas
SpeciesRhodopseudomonas pseudopalustris
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
Shaperod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Rhodopseudomonas pseudopalustris
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatsoil
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodopseudomonas pseudopalustris strain DSM 123 genome assembly,

Gene Summary

Adenine Count

935828 bp

Thymine Count

930059 bp

Guanine Count

1703505 bp

Cytosine Count

1702947 bp

Genome Length

5272456 bp

Protein-coding Genes

4728 genes

Non-Coding Genes

154 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
lipoprotein-releasing system permease proteinSAMN05444123_105318Not AvailableNegative2769323 - 277059146169.6
prolyl-trna synthetaseSAMN05444123_105319Not AvailableNegative2770660 - 277197949232.9
hypothetical proteinSAMN05444123_105320Not AvailableNegative2772255 - 277277617755.7
protein of unknown functionSAMN05444123_105321Not AvailableNegative2772982 - 277336213105.0
predicted secreted proteinSAMN05444123_105322Not AvailableNegative2773909 - 277419310250.7
methylmalonyl-coa epimerase /ethylmalonyl-coa epimeraseSAMN05444123_105323Not AvailableNegative2774194 - 277459814269.3
ribonuclease jSAMN05444123_105324Not AvailableNegative2774737 - 277640760211.7
bira family transcriptional regulator, biotin operon repressor / biotin-[acetyl-coa-carboxylase] ligaseSAMN05444123_105325Not AvailableNegative2776407 - 277721627842.0
nadh dehydrogenase subunit nSAMN05444123_105326Not AvailableNegative2777217 - 277865350490.5
nadh dehydrogenase subunit mSAMN05444123_105327Not AvailableNegative2778673 - 278019055180.0

Displaying genes 2671 – 2680 of 4882 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.