Rhodopseudomonas pseudopalustris

rodanaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Nitrobacteraceae

Genus

Rhodopseudomonas

Description

Rhodopseudomonas pseudopalustris is a Gram-negative, rod-shaped bacterium known for its anaerobic lifestyle. This organism thrives in environments devoid of oxygen, which is characteristic of its metabolic processes. R. pseudopalustris possesses flagella, enabling motility and facilitating its movement within its ecological niche. The bacterium has a single replicon, indicating a streamlined genomic organization that is typical for many prokaryotes. The genomic data for R. pseudopalustris can be accessed under the accession number FODT00000000.1, which provides a resource for researchers interested in studying its genetic makeup and functional capabilities. Rhodopseudomonas pseudopalustris exhibits a versatile metabolism, allowing it to utilize a variety of substrates for growth and energy. This adaptability may contribute to its ecological role in various habitats, including aquatic environments where it can participate in nutrient cycling and contribute to the overall microbial community dynamics. Understanding the specific characteristics of R. pseudopalustris can provide insights into its ecological functions, particularly in anaerobic conditions, where it may play a role in processes such as photosynthesis and nitrogen fixation.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyNitrobacteraceae
GenusRhodopseudomonas
SpeciesRhodopseudomonas pseudopalustris
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
Shaperod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Rhodopseudomonas pseudopalustris
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatsoil
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodopseudomonas pseudopalustris strain DSM 123 genome assembly,

Gene Summary

Adenine Count

935828 bp

Thymine Count

930059 bp

Guanine Count

1703505 bp

Cytosine Count

1702947 bp

Genome Length

5272456 bp

Protein-coding Genes

4728 genes

Non-Coding Genes

154 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
protein translocase subunit secfSAMN05444123_105228Not AvailableNegative2670305 - 267141440393.9
preprotein translocase subunit secdSAMN05444123_105229Not AvailableNegative2671440 - 267304157292.9
protein translocase subunit yajcSAMN05444123_105230Not AvailableNegative2673082 - 267352215832.2
hypothetical proteinSAMN05444123_105231Not AvailablePositive2673712 - 267468935707.8
opacity proteinSAMN05444123_105232Not AvailablePositive2674778 - 267649061250.9
murein dd-endopeptidase mepm and murein hydrolase activator nlpd, contain lysm domainSAMN05444123_105233Not AvailableNegative2676684 - 267807547726.8
protein-l-isoaspartate(d-aspartate) o-methyltransferaseSAMN05444123_105234Not AvailableNegative2678220 - 267891525376.9
chey chemotaxis protein or a chey-like rec (receiver) domainSAMN05444123_105235Not AvailablePositive2679087 - 267945813325.2
5'-nucleotidase /3'-nucleotidase /exopolyphosphataseSAMN05444123_105236Not AvailableNegative2679599 - 268036627497.0
hypothetical proteinSAMN05444123_105237Not AvailablePositive2680587 - 26808659885.16

Displaying genes 2581 – 2590 of 4882 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.