Pseudomonas chlororaphis subsp. piscium

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas chlororaphis subsp. piscium is a Gram-negative bacterium characterized by its rod-shaped morphology. This subspecies is part of the broader Pseudomonas genus, known for a diverse range of ecological roles and metabolic capabilities. The organism has a single replicon, which is indicative of its genetic structure and can influence its replication and adaptability in various environments. The genetic information for Pseudomonas chlororaphis subsp. piscium is documented under the accession number NZ_CP027708.1, providing a resource for further studies into its genetics and potential applications. This subspecies is known for its ecological significance, particularly in relation to plant interactions. Members of the Pseudomonas genus, including Pseudomonas chlororaphis subsp. piscium, are often involved in the rhizosphere, where they can promote plant growth and suppress plant pathogens. This capability is attributed to their production of various secondary metabolites and compounds that can enhance plant health. In summary, Pseudomonas chlororaphis subsp. piscium exhibits key traits such as its Gram-negative status, rod shape, and unique genetic characteristics. Its role in promoting plant health and interacting within the rhizosphere underscores its significance in agricultural and ecological contexts.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas chlororaphis
Strainsubsp. piscium

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas chlororaphis subsp. piscium
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas chlororaphis subsp. piscium strain ATCC 17411

Gene Summary

Adenine Count

1356663 bp

Thymine Count

1351398 bp

Guanine Count

2244520 bp

Cytosine Count

2259816 bp

Genome Length

7212397 bp

Protein-coding Genes

6321 genes

Non-Coding Genes

209 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
duf2931 family proteinC4K37_RS12830Not AvailableNegative2790680 - 279133324320.9
phospholipase effector tle1 domain-containing proteinC4K37_RS12835Not AvailableNegative2791333 - 279291058662.5
c4-dicarboxylate trap substrate-binding protein dctpC4K37_RS12840Not AvailablePositive2793163 - 279415236697.1
trap transporter small permeaseC4K37_RS12845Not AvailablePositive2794242 - 279487423587.4
c4-dicarboxylate trap transporter large permease protein dctmC4K37_RS12850Not AvailablePositive2794874 - 279615745232.8
dna-3-methyladenine glycosylase family proteinC4K37_RS12855Not AvailableNegative2796335 - 279695222890.7
arsenical resistance protein arshC4K37_RS12860Not AvailableNegative2797039 - 279777327705.2
arsenate reductase arscC4K37_RS12865Not AvailableNegative2797773 - 279824316575.6
isoprenylcysteine carboxylmethyltransferase family proteinC4K37_RS12870Not AvailablePositive2798485 - 279919525714.8
hypothetical proteinC4K37_RS12875Not AvailableNegative2799254 - 279958912721.2

Displaying genes 2611 – 2620 of 6530 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.