Pseudomonas chlororaphis subsp. piscium

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas chlororaphis subsp. piscium is a Gram-negative bacterium characterized by its rod-shaped morphology. This subspecies is part of the broader Pseudomonas genus, known for a diverse range of ecological roles and metabolic capabilities. The organism has a single replicon, which is indicative of its genetic structure and can influence its replication and adaptability in various environments. The genetic information for Pseudomonas chlororaphis subsp. piscium is documented under the accession number NZ_CP027708.1, providing a resource for further studies into its genetics and potential applications. This subspecies is known for its ecological significance, particularly in relation to plant interactions. Members of the Pseudomonas genus, including Pseudomonas chlororaphis subsp. piscium, are often involved in the rhizosphere, where they can promote plant growth and suppress plant pathogens. This capability is attributed to their production of various secondary metabolites and compounds that can enhance plant health. In summary, Pseudomonas chlororaphis subsp. piscium exhibits key traits such as its Gram-negative status, rod shape, and unique genetic characteristics. Its role in promoting plant health and interacting within the rhizosphere underscores its significance in agricultural and ecological contexts.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas chlororaphis
Strainsubsp. piscium

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas chlororaphis subsp. piscium
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas chlororaphis subsp. piscium strain ATCC 17411

Gene Summary

Adenine Count

1356663 bp

Thymine Count

1351398 bp

Guanine Count

2244520 bp

Cytosine Count

2259816 bp

Genome Length

7212397 bp

Protein-coding Genes

6321 genes

Non-Coding Genes

209 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
duf6572 domain-containing proteinC4K37_RS12025Not AvailableNegative2621953 - 262230913417.3
hypothetical proteinC4K37_RS12030Not AvailableNegative2622335 - 26225447422.06
fkbp-type peptidyl-prolyl cis-trans isomeraseC4K37_RS12035Not AvailablePositive2622817 - 262315512322.0
pyocin s6 family toxin immunity proteinC4K37_RS12040Not AvailableNegative2623298 - 26235378851.52
hypothetical proteinC4K37_RS12045Not AvailablePositive2623696 - 262434623816.1
bacteriocin immunity proteinC4K37_RS12050Not AvailableNegative2624586 - 26248409579.14
s-type pyocin domain-containing proteinC4K37_RS12055Not AvailableNegative2624841 - 262609144651.0
oprd family outer membrane porinC4K37_RS12060Not AvailablePositive2626220 - 26263815814.14
metal/formaldehyde-sensitive transcriptional repressorC4K37_RS12065Not AvailablePositive2626604 - 26268769930.93
cdf family co(ii)/ni(ii) efflux transporter dmefC4K37_RS12070Not AvailablePositive2626891 - 262784733467.3

Displaying genes 2451 – 2460 of 6530 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.