Pseudomonas chlororaphis subsp. piscium

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas chlororaphis subsp. piscium is a Gram-negative bacterium characterized by its rod-shaped morphology. This subspecies is part of the broader Pseudomonas genus, known for a diverse range of ecological roles and metabolic capabilities. The organism has a single replicon, which is indicative of its genetic structure and can influence its replication and adaptability in various environments. The genetic information for Pseudomonas chlororaphis subsp. piscium is documented under the accession number NZ_CP027708.1, providing a resource for further studies into its genetics and potential applications. This subspecies is known for its ecological significance, particularly in relation to plant interactions. Members of the Pseudomonas genus, including Pseudomonas chlororaphis subsp. piscium, are often involved in the rhizosphere, where they can promote plant growth and suppress plant pathogens. This capability is attributed to their production of various secondary metabolites and compounds that can enhance plant health. In summary, Pseudomonas chlororaphis subsp. piscium exhibits key traits such as its Gram-negative status, rod shape, and unique genetic characteristics. Its role in promoting plant health and interacting within the rhizosphere underscores its significance in agricultural and ecological contexts.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas chlororaphis
Strainsubsp. piscium

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas chlororaphis subsp. piscium
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas chlororaphis subsp. piscium strain ATCC 17411

Gene Summary

Adenine Count

1356663 bp

Thymine Count

1351398 bp

Guanine Count

2244520 bp

Cytosine Count

2259816 bp

Genome Length

7212397 bp

Protein-coding Genes

6321 genes

Non-Coding Genes

209 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
coa-transferase subunit betaC4K37_RS06725Not AvailablePositive1471178 - 147196027150.5
3-oxoadipyl-coa thiolaseC4K37_RS06730Not AvailablePositive1471957 - 147316241880.6
protocatechuate 3,4-dioxygenase subunit betaC4K37_RS06735Not AvailablePositive1473192 - 147389626339.0
protocatechuate 3,4-dioxygenase subunit alphaC4K37_RS06740Not AvailablePositive1473898 - 147446420611.3
mfs family transporterC4K37_RS06745Not AvailablePositive1474594 - 147588947164.4
3-carboxy-cis,cis-muconate cycloisomeraseC4K37_RS06750Not AvailablePositive1475937 - 147730148311.4
3-oxoadipate enol-lactonaseC4K37_RS06755Not AvailablePositive1477313 - 147811328805.2
4-carboxymuconolactone decarboxylaseC4K37_RS06760Not AvailablePositive1478125 - 147851714690.6
oprd family porinC4K37_RS06765Not AvailableNegative1478742 - 148000746408.5
adec/adek/oprm family multidrug efflux complex outer membrane factorC4K37_RS06770Not AvailableNegative1480307 - 148176752690.8

Displaying genes 1441 – 1450 of 6530 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.