Rahnella woolbedingensis str. DSM 27399

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Yersiniaceae

Genus

Rahnella

Description

Rahnella woolbedingensis str. DSM 27399 is a Gram-negative bacterium characterized by its single replicon structure. The strain is cataloged under the accession number RAHH00000000.1, providing a reference point for genomic studies and further research. As a member of the genus Rahnella, this bacterium is notable for its potential ecological roles, particularly in soil and aquatic environments where it may contribute to nutrient cycling and the degradation of organic materials. Gram-negative bacteria are typically known for their complex cell wall structures, which can confer certain advantages in diverse habitats, including resistance to specific antibiotics and the ability to interact with other microbial communities. The presence of a single replicon suggests a streamlined genomic organization that may facilitate efficient replication and adaptation to environmental changes. Understanding the genetic basis of Rahnella woolbedingensis str. DSM 27399 could further illuminate its metabolic pathways and ecological functions. In summary, Rahnella woolbedingensis str. DSM 27399 represents an intriguing subject for microbiological research, particularly in the context of its ecological interactions and contributions to ecosystem health. Its classification as a Gram-negative bacterium with a singular replicon may provide insights into its adaptive strategies and functional roles in various environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyYersiniaceae
GenusRahnella
SpeciesRahnella woolbedingensis
StrainDSM 27399

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rahnella woolbedingensis strain DSM 27399 contig_00114, whole

Gene Summary

Adenine Count

1304243 bp

Thymine Count

1304463 bp

Guanine Count

1421348 bp

Cytosine Count

1427377 bp

Genome Length

5457431 bp

Protein-coding Genes

4684 genes

Non-Coding Genes

319 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
transcriptional regulator lsrrD6C13_00870Not AvailableNegative190377 - 19135134624.1
autoinducer 2 abc transporter atp-binding protein lsraD6C13_00875Not AvailablePositive191583 - 19314555653.0
autoinducer 2 abc transporter permease lsrcD6C13_00880Not AvailablePositive193139 - 19421538044.1
autoinducer 2 abc transporter permease lsrdD6C13_00885Not AvailablePositive194215 - 19524035464.4
autoinducer 2 abc transporter substrate-binding protein lsrbD6C13_00890Not AvailablePositive195254 - 19627036296.4
3-hydroxy-5-phosphonooxypentane-2,4-dione thiolaseD6C13_00895Not AvailablePositive196290 - 19716531535.1
(4s)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomeraseD6C13_00900Not AvailablePositive197169 - 19745911010.2
xylulokinaseD6C13_00905Not AvailableNegative197798 - 19924952158.7
xylose isomeraseD6C13_00910Not AvailableNegative199341 - 20066049439.2
d-xylose abc transporter substrate-binding proteinD6C13_00915Not AvailablePositive201042 - 20203435574.9

Displaying genes 481 – 490 of 5003 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.