Permianibacter aggregans str. DSM 103792

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Permianibacter

Description

Permianibacter aggregans str. DSM 103792 is a notable bacterium characterized by a single replicon, indicating its genomic structure is relatively straightforward. This organism is cataloged under the accession number SNYM00000000.1, which serves as a unique identifier for its genomic sequence in databases. The designation "Permianibacter" suggests that this bacterium may be associated with environments influenced by Permian geological conditions, although specific ecological or habitat details are not provided. As a member of the microbial community, Permianibacter aggregans could play a role in nutrient cycling or other ecological processes, particularly in environments that reflect its evolutionary history. The simplicity of having a single replicon may allow for efficient replication and a streamlined cellular function, which could be advantageous in its native habitat. Understanding the traits and characteristics of Permianibacter aggregans str. DSM 103792 contributes to a broader comprehension of microbial diversity and ecological interactions, particularly in environments that have been shaped by historical geological events like the Permian period. Further research could elucidate its specific ecological roles and potential applications in biotechnology or environmental management.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPermianibacter
SpeciesPermianibacter aggregans
StrainDSM 103792

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Permianibacter aggregans strain DSM 103792 Ga0310476_147, whole

Gene Summary

Adenine Count

955030 bp

Thymine Count

956573 bp

Guanine Count

1141220 bp

Cytosine Count

1142874 bp

Genome Length

4196277 bp

Protein-coding Genes

3737 genes

Non-Coding Genes

49 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
tatd dnase family proteinEV696_101239Not AvailablePositive246757 - 24756029776.6
glutaryl-coa dehydrogenaseEV696_101240Not AvailablePositive247833 - 24902944154.1
s41a family c-terminal processing peptidase-1EV696_101241Not AvailablePositive249279 - 25140279190.8
cyclic nucleotide-binding proteinEV696_101242Not AvailablePositive251512 - 25230329129.1
glycine oxidaseEV696_101243Not AvailablePositive252309 - 25339440175.3
two-component response regulator pilrEV696_101244Not AvailableNegative253407 - 25477750236.1
two-component system sensor histidine kinase pils (ntrc family)EV696_101245Not AvailableNegative254774 - 25641160604.1
nad+ synthase (glutamine-hydrolysing)EV696_101246Not AvailablePositive256621 - 25823160041.7
nitrogen regulatory protein p-ii familyEV696_101247Not AvailablePositive258280 - 25861812542.3
putative zn-dependent proteaseEV696_101248Not AvailableNegative258640 - 26003151610.1

Displaying genes 241 – 250 of 3786 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.