Vibrio coralliirubri

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio coralliirubri is a bacterial species characterized by having two replicons, indicating a complex genomic structure that may contribute to its adaptability in various environments. The species is cataloged under the accessions CCKF00000000.1 and CCKO00000000.1, which provide a basis for genomic studies and further characterization. This bacterium is part of the Vibrio genus, which is known for its diverse ecological roles, particularly in marine environments. The presence of two replicons might suggest a potential for genetic versatility, allowing Vibrio coralliirubri to thrive in challenging conditions. Such genomic architecture can facilitate rapid adaptation through horizontal gene transfer, which is a common trait among Vibrio species. Ecologically, Vibrio coralliirubri is likely to play a significant role in marine ecosystems, possibly influencing the health of coral reefs and other aquatic life. Its adaptability may allow it to interact with various host organisms or contribute to nutrient cycling in marine environments. Understanding this species' genomic features and ecological interactions can provide insights into the dynamics of marine microbiomes and the overall health of aquatic ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio coralliirubri
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Vibrio coralliirubri
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Vibrio coralliirubri strain J2-4 genome assembly, contig:

Gene Summary

Adenine Count

1567833 bp

Thymine Count

1580735 bp

Guanine Count

1264101 bp

Cytosine Count

1245569 bp

Genome Length

5658238 bp

Protein-coding Genes

5238 genes

Non-Coding Genes

56 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
spermidine/putrescine transport system permease protein potcVCR4J2_600045Not AvailablePositive4525278 - 452604828006.4
spermidine/putrescine-binding periplasmic proteinVCR4J2_600046Not AvailablePositive4526196 - 452723038625.8
spermidine/putrescine-binding periplasmic proteinVCR4J2_600047Not AvailablePositive4527442 - 452847939141.2
ggdef family proteinVCR4J2_600048Not AvailablePositive4528577 - 452935029465.8
nad-dependent deacetylaseVCR4J2_600049Not AvailableNegative4529496 - 453023026911.0
putative ammonia permeaseVCR4J2_600050Not AvailableNegative4530488 - 453170843085.6
hypothetical proteinVCR4J2_600051Not AvailableNegative4532248 - 453266415642.1
putative formate dehydrogenase-o gamma subunitVCR4J2_600052Not AvailableNegative4532648 - 453372140166.3
formate dehydrogenase, iron-sulfur subunitVCR4J2_600053Not AvailableNegative4533735 - 453434321887.0
formate dehydrogenase subunit aVCR4J2_600054Not AvailableNegative4534355 - 4537210106409.0

Displaying genes 4231 – 4240 of 10570 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.