Vibrio coralliirubri

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio coralliirubri is a bacterial species characterized by having two replicons, indicating a complex genomic structure that may contribute to its adaptability in various environments. The species is cataloged under the accessions CCKF00000000.1 and CCKO00000000.1, which provide a basis for genomic studies and further characterization. This bacterium is part of the Vibrio genus, which is known for its diverse ecological roles, particularly in marine environments. The presence of two replicons might suggest a potential for genetic versatility, allowing Vibrio coralliirubri to thrive in challenging conditions. Such genomic architecture can facilitate rapid adaptation through horizontal gene transfer, which is a common trait among Vibrio species. Ecologically, Vibrio coralliirubri is likely to play a significant role in marine ecosystems, possibly influencing the health of coral reefs and other aquatic life. Its adaptability may allow it to interact with various host organisms or contribute to nutrient cycling in marine environments. Understanding this species' genomic features and ecological interactions can provide insights into the dynamics of marine microbiomes and the overall health of aquatic ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio coralliirubri
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Vibrio coralliirubri
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Vibrio coralliirubri strain J2-4 genome assembly, contig:

Gene Summary

Adenine Count

1567833 bp

Thymine Count

1580735 bp

Guanine Count

1264101 bp

Cytosine Count

1245569 bp

Genome Length

5658238 bp

Protein-coding Genes

5238 genes

Non-Coding Genes

56 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
leucyl/phenylalanyl-trna--protein transferaseVCR4J2_520067Not AvailablePositive3493159 - 349386926898.9
putative arginine-trna-protein transferaseVCR4J2_520068Not AvailablePositive3493869 - 349456727390.7
translation initiation factor if-1VCR4J2_520069Not AvailablePositive3494649 - 34948678223.14
atp-dependent clp protease atp-binding subunit clpaVCR4J2_520070Not AvailableNegative3495090 - 349736383542.0
atp-dependent clp protease adapter protein clpsVCR4J2_520071Not AvailableNegative3497403 - 349772312114.5
cold shock-like protein cspdVCR4J2_520072Not AvailablePositive3498309 - 34985307786.03
isocitrate dehydrogenase (nadp)VCR4J2_520073Not AvailableNegative3498861 - 350108680078.9
hypothetical proteinVCR4J2_520074Not AvailableNegative3501356 - 35015356788.64
ribosomal large subunit pseudouridine synthase eVCR4J2_520075Not AvailablePositive3501408 - 350213627230.4
conserved exported hypothetical proteinVCR4J2_520076Not AvailableNegative3502210 - 350285723915.2

Displaying genes 3261 – 3270 of 10570 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.