Vibrio coralliirubri

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio coralliirubri is a bacterial species characterized by having two replicons, indicating a complex genomic structure that may contribute to its adaptability in various environments. The species is cataloged under the accessions CCKF00000000.1 and CCKO00000000.1, which provide a basis for genomic studies and further characterization. This bacterium is part of the Vibrio genus, which is known for its diverse ecological roles, particularly in marine environments. The presence of two replicons might suggest a potential for genetic versatility, allowing Vibrio coralliirubri to thrive in challenging conditions. Such genomic architecture can facilitate rapid adaptation through horizontal gene transfer, which is a common trait among Vibrio species. Ecologically, Vibrio coralliirubri is likely to play a significant role in marine ecosystems, possibly influencing the health of coral reefs and other aquatic life. Its adaptability may allow it to interact with various host organisms or contribute to nutrient cycling in marine environments. Understanding this species' genomic features and ecological interactions can provide insights into the dynamics of marine microbiomes and the overall health of aquatic ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio coralliirubri
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Vibrio coralliirubri
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Vibrio coralliirubri strain J2-4 genome assembly, contig:

Gene Summary

Adenine Count

1567833 bp

Thymine Count

1580735 bp

Guanine Count

1264101 bp

Cytosine Count

1245569 bp

Genome Length

5658238 bp

Protein-coding Genes

5238 genes

Non-Coding Genes

56 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
conserved hypothetical proteinVCR4J2_50017Not AvailablePositive3064844 - 306554226336.0
phosphoribosylamine--glycine ligaseVCR4J2_50018Not AvailableNegative3065725 - 306701445660.3
bifunctional purine biosynthesis protein purh (includes: phosphoribosylaminoimidazolecarboxamide formyltransferaseVCR4J2_50019Not AvailableNegative3067100 - 306869257486.1
putative zn(ii)-responsive transcriptional regulatorVCR4J2_50020Not AvailablePositive3069018 - 306945816243.4
dna-binding protein fisVCR4J2_50021Not AvailableNegative3069549 - 306984511098.4
pp_02830VCR4J2_50022Not AvailableNegative3069869 - 3070789Not Available
ribosomal protein l11 methyltransferaseVCR4J2_50023Not AvailableNegative3070979 - 307186632264.5
acetyl-coa carboxylase, biotin carboxylase subunitVCR4J2_50024Not AvailableNegative3072037 - 307338049287.5
biotin carboxyl carrier protein of acetyl-coa carboxylaseVCR4J2_50025Not AvailableNegative3073396 - 307384815478.7
3-dehydroquinate dehydrataseVCR4J2_50026Not AvailableNegative3073923 - 307437216430.6

Displaying genes 2861 – 2870 of 10570 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.