Vibrio coralliirubri

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio coralliirubri is a bacterial species characterized by having two replicons, indicating a complex genomic structure that may contribute to its adaptability in various environments. The species is cataloged under the accessions CCKF00000000.1 and CCKO00000000.1, which provide a basis for genomic studies and further characterization. This bacterium is part of the Vibrio genus, which is known for its diverse ecological roles, particularly in marine environments. The presence of two replicons might suggest a potential for genetic versatility, allowing Vibrio coralliirubri to thrive in challenging conditions. Such genomic architecture can facilitate rapid adaptation through horizontal gene transfer, which is a common trait among Vibrio species. Ecologically, Vibrio coralliirubri is likely to play a significant role in marine ecosystems, possibly influencing the health of coral reefs and other aquatic life. Its adaptability may allow it to interact with various host organisms or contribute to nutrient cycling in marine environments. Understanding this species' genomic features and ecological interactions can provide insights into the dynamics of marine microbiomes and the overall health of aquatic ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio coralliirubri
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Vibrio coralliirubri
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Vibrio coralliirubri strain J2-4 genome assembly, contig:

Gene Summary

Adenine Count

1567833 bp

Thymine Count

1580735 bp

Guanine Count

1264101 bp

Cytosine Count

1245569 bp

Genome Length

5658238 bp

Protein-coding Genes

5238 genes

Non-Coding Genes

56 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
sigma-e factor negative regulatory proteinVCR4J2_390035Not AvailableNegative2864149 - 286478423062.1
rna polymerase sigma-e factor (sigma 24)VCR4J2_390036Not AvailableNegative2864799 - 286537721757.9
conserved hypothetical proteinVCR4J2_390037Not AvailableNegative2865343 - 28655738333.83
l-aspartate oxidaseVCR4J2_390038Not AvailablePositive2865767 - 286738360391.4
conserved hypothetical proteinVCR4J2_390039Not AvailableNegative2867519 - 286793816412.1
conserved hypothetical proteinVCR4J2_390040Not AvailableNegative2867886 - 286814610050.1
putative trna-modifying protein ygfz 1VCR4J2_390041Not AvailablePositive2868314 - 286928535646.1
putative ybak/aminoacyl-trna synthetase-associated domainVCR4J2_390042Not AvailablePositive2869290 - 286975116735.4
conserved hypothetical proteinVCR4J2_390043Not AvailablePositive2870314 - 28705208098.08
putative ubiquinone biosynthesis hydroxylase, ubih/ubif/visc/coq6VCR4J2_390044Not AvailableNegative2870632 - 287185544521.7

Displaying genes 2631 – 2640 of 10570 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.