Vibrio coralliirubri

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio coralliirubri is a bacterial species characterized by having two replicons, indicating a complex genomic structure that may contribute to its adaptability in various environments. The species is cataloged under the accessions CCKF00000000.1 and CCKO00000000.1, which provide a basis for genomic studies and further characterization. This bacterium is part of the Vibrio genus, which is known for its diverse ecological roles, particularly in marine environments. The presence of two replicons might suggest a potential for genetic versatility, allowing Vibrio coralliirubri to thrive in challenging conditions. Such genomic architecture can facilitate rapid adaptation through horizontal gene transfer, which is a common trait among Vibrio species. Ecologically, Vibrio coralliirubri is likely to play a significant role in marine ecosystems, possibly influencing the health of coral reefs and other aquatic life. Its adaptability may allow it to interact with various host organisms or contribute to nutrient cycling in marine environments. Understanding this species' genomic features and ecological interactions can provide insights into the dynamics of marine microbiomes and the overall health of aquatic ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio coralliirubri
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Vibrio coralliirubri
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Vibrio coralliirubri strain J2-4 genome assembly, contig:

Gene Summary

Adenine Count

1567833 bp

Thymine Count

1580735 bp

Guanine Count

1264101 bp

Cytosine Count

1245569 bp

Genome Length

5658238 bp

Protein-coding Genes

5238 genes

Non-Coding Genes

56 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
conserved hypothetical proteinVCR4J2_120012Not AvailableNegative200307 - 20078918236.6
phospho-2-dehydro-3-deoxyheptonate aldolase, trp-sensitiveVCR4J2_120013Not AvailableNegative200802 - 20186039058.6
phosphoenolpyruvate synthaseVCR4J2_120014Not AvailablePositive202068 - 20295532154.3
putative thioesterase/thiol ester dehydrase-isomeraseVCR4J2_120015Not AvailablePositive203132 - 20361718001.1
conserved hypothetical proteinVCR4J2_120016Not AvailableNegative203711 - 20506652822.0
putative nucleic acid binding protein, yitl typeVCR4J2_120017Not AvailablePositive205164 - 20600330773.2
ribosomal rna small subunit methyltransferase fVCR4J2_120018Not AvailableNegative206304 - 20772552859.0
putative paraquat-inducible protein bVCR4J2_120019Not AvailableNegative207876 - 21053395636.9
putative paraquat-inducible protein aVCR4J2_120020Not AvailableNegative210520 - 21179147082.6
putative lipid a export atp-binding/permease protein msbaVCR4J2_120021Not AvailableNegative211858 - 21365467141.1

Displaying genes 201 – 210 of 10570 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.