Sphingopyxis flava

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingopyxidaceae

Genus

Sphingopyxis

Description

Sphingopyxis flava is a rod-shaped bacterium characterized by a single replicon, indicating a simpler genomic architecture compared to organisms with multiple replicons. This trait might contribute to its adaptability and efficiency in various environments. The bacterium is cataloged under the accession FUYP00000000.1, which serves as a reference for its genetic information. As a member of the Sphingopyxis genus, Sphingopyxis flava is likely to possess unique metabolic capabilities that allow it to thrive in diverse ecological niches. While specific metabolic pathways and ecological roles are not detailed here, the genus is known for its ability to degrade various organic compounds, which may suggest that Sphingopyxis flava plays a role in bioremediation or nutrient cycling in its habitat. Understanding the traits of Sphingopyxis flava contributes to the broader knowledge of microbial diversity and ecological functionality. Its rod shape and genomic structure may provide insights into how this organism adapts to environmental changes and interacts with other microbial communities, potentially influencing soil health and ecosystem dynamics.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingopyxidaceae
GenusSphingopyxis
SpeciesSphingopyxis flava
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingopyxis flava strain R11H genome assembly, contig:

Gene Summary

Adenine Count

752364 bp

Thymine Count

753898 bp

Guanine Count

1322518 bp

Cytosine Count

1326519 bp

Genome Length

4155299 bp

Protein-coding Genes

0 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
formate dehydrogenase alpha subunitSAMN06295937_10585Not AvailableNegative3968697 - 3971540103525.0
formate dehydrogenase beta subunitSAMN06295937_10586Not AvailableNegative3971545 - 397311954637.5
formate dehydrogenase gamma subunitSAMN06295937_10587Not AvailableNegative3973116 - 397358316685.1
dna-binding transcriptional regulator, lysr familySAMN06295937_10588Not AvailableNegative3973671 - 397457332378.5
transposase is66 family proteinSAMN06295937_10589Not AvailablePositive3974827 - 397515912473.1
hypothetical proteinSAMN06295937_105810Not AvailablePositive3975161 - 39753918531.04
hypothetical proteinSAMN06295937_105811Not AvailableNegative3975497 - 39757669185.44
glutathione s-transferase, n-terminal domainSAMN06295937_10591Not AvailableNegative3975905 - 39761508654.16
outer membrane receptor proteins, mostly fe transportSAMN06295937_10592Not AvailableNegative3976244 - 397868888136.8
transcriptional regulator, iclr familySAMN06295937_10593Not AvailableNegative3978974 - 397983130902.4

Displaying genes 4031 – 4040 of 4244 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.