Sphingopyxis flava

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingopyxidaceae

Genus

Sphingopyxis

Description

Sphingopyxis flava is a rod-shaped bacterium characterized by a single replicon, indicating a simpler genomic architecture compared to organisms with multiple replicons. This trait might contribute to its adaptability and efficiency in various environments. The bacterium is cataloged under the accession FUYP00000000.1, which serves as a reference for its genetic information. As a member of the Sphingopyxis genus, Sphingopyxis flava is likely to possess unique metabolic capabilities that allow it to thrive in diverse ecological niches. While specific metabolic pathways and ecological roles are not detailed here, the genus is known for its ability to degrade various organic compounds, which may suggest that Sphingopyxis flava plays a role in bioremediation or nutrient cycling in its habitat. Understanding the traits of Sphingopyxis flava contributes to the broader knowledge of microbial diversity and ecological functionality. Its rod shape and genomic structure may provide insights into how this organism adapts to environmental changes and interacts with other microbial communities, potentially influencing soil health and ecosystem dynamics.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingopyxidaceae
GenusSphingopyxis
SpeciesSphingopyxis flava
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingopyxis flava strain R11H genome assembly, contig:

Gene Summary

Adenine Count

752364 bp

Thymine Count

753898 bp

Guanine Count

1322518 bp

Cytosine Count

1326519 bp

Genome Length

4155299 bp

Protein-coding Genes

0 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
transposaseSAMN06295937_103915Not AvailableNegative3709841 - 371084836582.8
hypothetical proteinSAMN06295937_10401Not AvailablePositive3711293 - 37115057763.97
hypothetical proteinSAMN06295937_10402Not AvailablePositive3711545 - 37117427259.68
cob(i)yrinic acid a,c-diamide adenosyltransferaseSAMN06295937_10404Not AvailablePositive3712457 - 371306522412.2
hydrogenobyrinic acid a,c-diamide synthase (glutamine-hydrolysing) /cobyrinate a,c-diamide synthaseSAMN06295937_10405Not AvailablePositive3713062 - 371436344777.6
vitamin b12 transporterSAMN06295937_10407Not AvailablePositive3714713 - 371667470401.4
hypothetical proteinSAMN06295937_10408Not AvailablePositive3716707 - 371725219083.6
predicted metal-binding proteinSAMN06295937_10409Not AvailablePositive3717255 - 371766214447.3
nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferaseSAMN06295937_104010Not AvailablePositive3717659 - 371867534079.9
alpha-ribazole phosphataseSAMN06295937_104011Not AvailablePositive3718672 - 371924120376.6

Displaying genes 3771 – 3780 of 4244 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.