Sphingopyxis flava

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingopyxidaceae

Genus

Sphingopyxis

Description

Sphingopyxis flava is a rod-shaped bacterium characterized by a single replicon, indicating a simpler genomic architecture compared to organisms with multiple replicons. This trait might contribute to its adaptability and efficiency in various environments. The bacterium is cataloged under the accession FUYP00000000.1, which serves as a reference for its genetic information. As a member of the Sphingopyxis genus, Sphingopyxis flava is likely to possess unique metabolic capabilities that allow it to thrive in diverse ecological niches. While specific metabolic pathways and ecological roles are not detailed here, the genus is known for its ability to degrade various organic compounds, which may suggest that Sphingopyxis flava plays a role in bioremediation or nutrient cycling in its habitat. Understanding the traits of Sphingopyxis flava contributes to the broader knowledge of microbial diversity and ecological functionality. Its rod shape and genomic structure may provide insights into how this organism adapts to environmental changes and interacts with other microbial communities, potentially influencing soil health and ecosystem dynamics.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingopyxidaceae
GenusSphingopyxis
SpeciesSphingopyxis flava
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingopyxis flava strain R11H genome assembly, contig:

Gene Summary

Adenine Count

752364 bp

Thymine Count

753898 bp

Guanine Count

1322518 bp

Cytosine Count

1326519 bp

Genome Length

4155299 bp

Protein-coding Genes

0 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
drug resistance transporter, emrb/qaca subfamilySAMN06295937_101687Not AvailableNegative2753985 - 275536448774.1
hypothetical proteinSAMN06295937_10171Not AvailablePositive2755476 - 27556004755.52
4-oxalomesaconate tautomeraseSAMN06295937_10172Not AvailableNegative2755767 - 275682236301.9
4-carboxy-4-hydroxy-2-oxoadipate aldolaseSAMN06295937_10173Not AvailableNegative2756815 - 275748923799.8
transcriptional regulatorSAMN06295937_10174Not AvailablePositive2757584 - 275878043287.7
3-hydroxyisobutyrate dehydrogenaseSAMN06295937_10175Not AvailablePositive2758843 - 275970629396.3
4-oxalomesaconate hydrataseSAMN06295937_10176Not AvailablePositive2759724 - 276074937416.6
2-pyrone-4,6-dicarboxylate hydrolaseSAMN06295937_10177Not AvailablePositive2760761 - 276164232864.3
tonb-dependent receptor plug domainSAMN06295937_10178Not AvailablePositive2761830 - 2764844107959.0
nitt/taut family transport system substrate-binding proteinSAMN06295937_10179Not AvailablePositive2764936 - 276591635592.5

Displaying genes 2801 – 2810 of 4244 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.