Sphingopyxis flava

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingopyxidaceae

Genus

Sphingopyxis

Description

Sphingopyxis flava is a rod-shaped bacterium characterized by a single replicon, indicating a simpler genomic architecture compared to organisms with multiple replicons. This trait might contribute to its adaptability and efficiency in various environments. The bacterium is cataloged under the accession FUYP00000000.1, which serves as a reference for its genetic information. As a member of the Sphingopyxis genus, Sphingopyxis flava is likely to possess unique metabolic capabilities that allow it to thrive in diverse ecological niches. While specific metabolic pathways and ecological roles are not detailed here, the genus is known for its ability to degrade various organic compounds, which may suggest that Sphingopyxis flava plays a role in bioremediation or nutrient cycling in its habitat. Understanding the traits of Sphingopyxis flava contributes to the broader knowledge of microbial diversity and ecological functionality. Its rod shape and genomic structure may provide insights into how this organism adapts to environmental changes and interacts with other microbial communities, potentially influencing soil health and ecosystem dynamics.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingopyxidaceae
GenusSphingopyxis
SpeciesSphingopyxis flava
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingopyxis flava strain R11H genome assembly, contig:

Gene Summary

Adenine Count

752364 bp

Thymine Count

753898 bp

Guanine Count

1322518 bp

Cytosine Count

1326519 bp

Genome Length

4155299 bp

Protein-coding Genes

0 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
two-component sensor histidine kinase, contains hiska and hatpase domainsSAMN06295937_101575Not AvailableNegative2630874 - 263241256722.3
dna-directed rna polymerase specialized sigma subunit, sigma24 familySAMN06295937_101576Not AvailablePositive2632618 - 263340928748.1
uncharacterized damage-inducible protein dinb (forms a four-helix bundle)SAMN06295937_101577Not AvailableNegative2633419 - 263390418097.5
transcriptional regulator, tetr familySAMN06295937_101578Not AvailablePositive2633997 - 263463823319.2
rna polymerase sigma-70 factor, ecf subfamilySAMN06295937_101579Not AvailableNegative2634651 - 263526822216.6
hypothetical proteinSAMN06295937_101580Not AvailablePositive2635498 - 26357499249.08
rna polymerase sigma-70 factor, ecf subfamilySAMN06295937_101581Not AvailablePositive2635746 - 263638723555.8
glucose/arabinose dehydrogenase, beta-propeller foldSAMN06295937_101582Not AvailablePositive2636549 - 263773041951.5
alpha/beta hydrolase foldSAMN06295937_101583Not AvailablePositive2637842 - 263859126609.0
protein n-acetyltransferase, rimj/riml familySAMN06295937_101584Not AvailableNegative2638596 - 263911418305.0

Displaying genes 2681 – 2690 of 4244 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.