Sphingopyxis flava

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingopyxidaceae

Genus

Sphingopyxis

Description

Sphingopyxis flava is a rod-shaped bacterium characterized by a single replicon, indicating a simpler genomic architecture compared to organisms with multiple replicons. This trait might contribute to its adaptability and efficiency in various environments. The bacterium is cataloged under the accession FUYP00000000.1, which serves as a reference for its genetic information. As a member of the Sphingopyxis genus, Sphingopyxis flava is likely to possess unique metabolic capabilities that allow it to thrive in diverse ecological niches. While specific metabolic pathways and ecological roles are not detailed here, the genus is known for its ability to degrade various organic compounds, which may suggest that Sphingopyxis flava plays a role in bioremediation or nutrient cycling in its habitat. Understanding the traits of Sphingopyxis flava contributes to the broader knowledge of microbial diversity and ecological functionality. Its rod shape and genomic structure may provide insights into how this organism adapts to environmental changes and interacts with other microbial communities, potentially influencing soil health and ecosystem dynamics.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingopyxidaceae
GenusSphingopyxis
SpeciesSphingopyxis flava
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingopyxis flava strain R11H genome assembly, contig:

Gene Summary

Adenine Count

752364 bp

Thymine Count

753898 bp

Guanine Count

1322518 bp

Cytosine Count

1326519 bp

Genome Length

4155299 bp

Protein-coding Genes

0 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
predicted dioxygenase of extradiol dioxygenase familySAMN06295937_101565Not AvailableNegative2620304 - 262068413300.8
formyltetrahydrofolate deformylaseSAMN06295937_101566Not AvailableNegative2620807 - 262167932254.7
catechol 2,3-dioxygenaseSAMN06295937_101567Not AvailableNegative2621681 - 262206713300.8
s-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenaseSAMN06295937_101568Not AvailableNegative2622080 - 262319239498.7
l-serine ammonia-lyaseSAMN06295937_101569Not AvailableNegative2623218 - 262459748097.4
superoxide dismutase, fe-mn familySAMN06295937_101570Not AvailableNegative2624834 - 262545122433.0
dna ligase-1SAMN06295937_101571Not AvailableNegative2625553 - 262713658113.5
putative mrna 3-end processing factorSAMN06295937_101572Not AvailableNegative2627133 - 262814637271.7
dna polymeraseSAMN06295937_101573Not AvailableNegative2628146 - 262957052757.3
putative dna modification/repair radical sam proteinSAMN06295937_101574Not AvailableNegative2629567 - 263081746048.7

Displaying genes 2671 – 2680 of 4244 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.