Sphingopyxis flava

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingopyxidaceae

Genus

Sphingopyxis

Description

Sphingopyxis flava is a rod-shaped bacterium characterized by a single replicon, indicating a simpler genomic architecture compared to organisms with multiple replicons. This trait might contribute to its adaptability and efficiency in various environments. The bacterium is cataloged under the accession FUYP00000000.1, which serves as a reference for its genetic information. As a member of the Sphingopyxis genus, Sphingopyxis flava is likely to possess unique metabolic capabilities that allow it to thrive in diverse ecological niches. While specific metabolic pathways and ecological roles are not detailed here, the genus is known for its ability to degrade various organic compounds, which may suggest that Sphingopyxis flava plays a role in bioremediation or nutrient cycling in its habitat. Understanding the traits of Sphingopyxis flava contributes to the broader knowledge of microbial diversity and ecological functionality. Its rod shape and genomic structure may provide insights into how this organism adapts to environmental changes and interacts with other microbial communities, potentially influencing soil health and ecosystem dynamics.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingopyxidaceae
GenusSphingopyxis
SpeciesSphingopyxis flava
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingopyxis flava strain R11H genome assembly, contig:

Gene Summary

Adenine Count

752364 bp

Thymine Count

753898 bp

Guanine Count

1322518 bp

Cytosine Count

1326519 bp

Genome Length

4155299 bp

Protein-coding Genes

0 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
merr hth family regulatory proteinSAMN06295937_100629Not AvailablePositive1279595 - 127999614130.0
phosphohistidine phosphataseSAMN06295937_100630Not AvailableNegative1280000 - 128055120178.2
atp-dependent dna helicase dingSAMN06295937_100631Not AvailableNegative1280600 - 128333297970.8
pilz domain-containing proteinSAMN06295937_100632Not AvailableNegative1283437 - 128380513667.5
lysyl-trna synthetase, class iSAMN06295937_100633Not AvailablePositive1283980 - 128560859886.4
l-asparaginaseSAMN06295937_100634Not AvailablePositive1285715 - 128619416992.5
fatty acid desaturaseSAMN06295937_100635Not AvailableNegative1286198 - 128722937607.6
diguanylate cyclase/phosphodiesterase with pas/pac sensor(s)SAMN06295937_100636Not AvailablePositive1287294 - 129002699093.5
nickel/cobalt transporter regulatorSAMN06295937_100637Not AvailableNegative1290093 - 129093234679.2
isoquinoline 1-oxidoreductase, alpha subunitSAMN06295937_100638Not AvailableNegative1291042 - 129158719468.3

Displaying genes 1421 – 1430 of 4244 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.