Sphingopyxis flava

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingopyxidaceae

Genus

Sphingopyxis

Description

Sphingopyxis flava is a rod-shaped bacterium characterized by a single replicon, indicating a simpler genomic architecture compared to organisms with multiple replicons. This trait might contribute to its adaptability and efficiency in various environments. The bacterium is cataloged under the accession FUYP00000000.1, which serves as a reference for its genetic information. As a member of the Sphingopyxis genus, Sphingopyxis flava is likely to possess unique metabolic capabilities that allow it to thrive in diverse ecological niches. While specific metabolic pathways and ecological roles are not detailed here, the genus is known for its ability to degrade various organic compounds, which may suggest that Sphingopyxis flava plays a role in bioremediation or nutrient cycling in its habitat. Understanding the traits of Sphingopyxis flava contributes to the broader knowledge of microbial diversity and ecological functionality. Its rod shape and genomic structure may provide insights into how this organism adapts to environmental changes and interacts with other microbial communities, potentially influencing soil health and ecosystem dynamics.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingopyxidaceae
GenusSphingopyxis
SpeciesSphingopyxis flava
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingopyxis flava strain R11H genome assembly, contig:

Gene Summary

Adenine Count

752364 bp

Thymine Count

753898 bp

Guanine Count

1322518 bp

Cytosine Count

1326519 bp

Genome Length

4155299 bp

Protein-coding Genes

0 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
g/u mismatch-specific uracil-dna glycosylaseSAMN06295937_1005220Not AvailableNegative1255950 - 125645317813.5
dde_tnp_1-associatedSAMN06295937_1005221Not AvailablePositive1256577 - 125684510135.9
Trna-thrNot AvailableNot AvailablePositive1257346 - 1257421Not Available
hypothetical proteinSAMN06295937_10062Not AvailableNegative1257440 - 125831230714.8
fe-s cluster biogenesis protein nfua, 4fe-4s-binding domainSAMN06295937_10063Not AvailablePositive1258367 - 125895420654.6
hypothetical protein/3-hydroxypropanoate dehydrogenaseSAMN06295937_10064Not AvailablePositive1258979 - 125957221561.3
trna threonylcarbamoyl adenosine modification protein yeazSAMN06295937_10065Not AvailablePositive1259591 - 126020820873.3
ribosomal-protein-alanine n-acetyltransferaseSAMN06295937_10066Not AvailablePositive1260205 - 126066616707.0
transcriptional regulator, mucr familySAMN06295937_10067Not AvailablePositive1260795 - 126122615601.0
ferric uptake regulator, fur familySAMN06295937_10068Not AvailablePositive1261362 - 126178716128.0

Displaying genes 1391 – 1400 of 4244 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.