actinobacterium acAMD-5

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Family

Genus

Description

Actinobacterium acAMD-5 is characterized by having a single replicon, which is indicative of its genetic organization. The organism is cataloged with the accession number JNSF00000000.1, providing a reference point for its genomic data within scientific databases. Actinobacteria are known for their diverse metabolic capabilities and their role in soil and plant environments, often contributing to nutrient cycling and the degradation of complex organic materials. This particular actinobacterium may exhibit similar ecological roles, although specific behaviors or interactions within its environment are not detailed in the provided information. The presence of a single replicon suggests a streamlined genomic structure, which could potentially enhance its adaptability and efficiency under certain environmental conditions. Actinobacteria are also recognized for their ability to produce bioactive compounds, which can have implications for antibiotic production and biotechnological applications. In summary, while Actinobacterium acAMD-5's specific ecological roles remain undefined, its single replicon structure may suggest a capacity for efficient adaptation, a trait advantageous for survival in diverse environments. The characterization of this organism contributes to the understanding of actinobacterial diversity and their potential applications in biotechnology and ecological research.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: actinobacterium acAMD-5 AMD-COM-C936, whole genome shotgun

Gene Summary

Adenine Count

345487 bp

Thymine Count

344827 bp

Guanine Count

283737 bp

Cytosine Count

267972 bp

Genome Length

1242023 bp

Protein-coding Genes

1259 genes

Non-Coding Genes

38 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
dna-directed rna polymerase subunit alphaGM45_2520Not AvailableNegative518776 - 51980137126.2
30s ribosomal protein s4GM45_2525Not AvailableNegative519907 - 52053323748.7
30s ribosomal protein s11GM45_2530Not AvailableNegative520551 - 52098215048.2
30s ribosomal protein s13GM45_2535Not AvailableNegative521002 - 52137914201.4
translation initiation factor if-1GM45_2540Not AvailableNegative521684 - 5219058454.4
adenylate kinaseGM45_2545Not AvailableNegative522058 - 52262120067.2
preprotein translocase subunit secyGM45_2550Not AvailableNegative522624 - 52391946503.1
50s ribosomal protein l15GM45_2555Not AvailableNegative523948 - 52439415608.2
50s ribosomal protein l30GM45_2560Not AvailableNegative524397 - 5245796739.35
30s ribosomal protein s5GM45_2565Not AvailableNegative524579 - 52518720873.3

Displaying genes 511 – 520 of 1297 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.