actinobacterium acAMD-5

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Family

Genus

Description

Actinobacterium acAMD-5 is characterized by having a single replicon, which is indicative of its genetic organization. The organism is cataloged with the accession number JNSF00000000.1, providing a reference point for its genomic data within scientific databases. Actinobacteria are known for their diverse metabolic capabilities and their role in soil and plant environments, often contributing to nutrient cycling and the degradation of complex organic materials. This particular actinobacterium may exhibit similar ecological roles, although specific behaviors or interactions within its environment are not detailed in the provided information. The presence of a single replicon suggests a streamlined genomic structure, which could potentially enhance its adaptability and efficiency under certain environmental conditions. Actinobacteria are also recognized for their ability to produce bioactive compounds, which can have implications for antibiotic production and biotechnological applications. In summary, while Actinobacterium acAMD-5's specific ecological roles remain undefined, its single replicon structure may suggest a capacity for efficient adaptation, a trait advantageous for survival in diverse environments. The characterization of this organism contributes to the understanding of actinobacterial diversity and their potential applications in biotechnology and ecological research.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: actinobacterium acAMD-5 AMD-COM-C936, whole genome shotgun

Gene Summary

Adenine Count

345487 bp

Thymine Count

344827 bp

Guanine Count

283737 bp

Cytosine Count

267972 bp

Genome Length

1242023 bp

Protein-coding Genes

1259 genes

Non-Coding Genes

38 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
arginyl-trna synthetaseGM45_5975Not AvailablePositive1180045 - 118171260575.1
hypothetical proteinGM45_5980Not AvailablePositive1181765 - 118310847501.4
homoserine dehydrogenaseGM45_5985Not AvailablePositive1183173 - 118446244773.9
threonine synthaseGM45_5990Not AvailablePositive1184459 - 118554137898.6
hypothetical proteinGM45_5995Not AvailablePositive1185544 - 118644631523.1
hypothetical proteinGM45_6000Not AvailablePositive1186600 - 118827362666.9
50s ribosomal protein l31GM45_6005Not AvailablePositive1188352 - 11886009476.35
peptide chain release factor 1GM45_6010Not AvailablePositive1188666 - 118973939610.8
hypothetical proteinGM45_6015Not AvailablePositive1189736 - 119063232805.4
sua5/ycio/yrdc/ywlc family proteinGM45_6020Not AvailablePositive1190632 - 119128823025.9

Displaying genes 1231 – 1240 of 1297 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.