Burkholderia singularis

aerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Burkholderiaceae

Genus

Burkholderia

Description

Burkholderia singularis is an aerobic bacterium characterized by its single replicon, indicating a streamlined genomic structure. This trait may contribute to its efficiency in metabolic processes and adaptability to aerobic environments where oxygen is readily available. The organism is cataloged under the accession number LOWA00000000.1, which provides a reference for further genomic studies and comparisons within the Burkholderia genus. As an aerobic species, Burkholderia singularis likely plays a role in various ecological niches where oxygen is present, potentially influencing biogeochemical cycles. Aerobic bacteria are crucial for the decomposition of organic matter, contributing to nutrient cycling in ecosystems. Their metabolic activities can support the growth of other organisms, forming complex interactions within microbial communities. Understanding the specific ecological role of Burkholderia singularis requires further investigation, especially in its interactions with other microorganisms and its environmental impact. However, its aerobic nature suggests it may thrive in environments rich in oxygen, participating in processes that sustain ecosystem health and stability.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyBurkholderiaceae
GenusBurkholderia
SpeciesBurkholderia singularis
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Burkholderia singularis strain TSV85 TSV85_9, whole genome shotgun

Gene Summary

Adenine Count

994006 bp

Thymine Count

992065 bp

Guanine Count

1782950 bp

Cytosine Count

1792412 bp

Genome Length

5561433 bp

Protein-coding Genes

4557 genes

Non-Coding Genes

78 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Holin gp22WS67_12230Not AvailablePositive2474591 - 247487510048.0
Glycoside hydrolase family proteinWS67_12235Not AvailablePositive2474878 - 247529715543.6
Duf2514 family proteinWS67_12240Not AvailablePositive2475294 - 247578216925.7
5s ribosomal rnaNot AvailableNot AvailablePositive24 - 136Not Available
transposaseWS67_02830Q56897Positive62 - 111139034.8
23s ribosomal rnaNot AvailableNot AvailablePositive245 - 3137Not Available
hypothetical proteinWS67_02835Not AvailablePositive1395 - 234233109.2
Trna-thrNot AvailableNot AvailablePositive3300 - 3375Not Available
16s ribosomal rnaNot AvailableNot AvailablePositive3710 - 5247Not Available
stringent starvation protein bWS67_02850P0AFZ4Negative3394 - 392418741.7

Displaying genes 21 – 30 of 4635 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

345 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000234(3R)-hydroxybutanoate dimerC8H13O5Chemical structure of (3R)-hydroxybutanoate dimerNot available
Average189.188Da
Monoisotopic189.0768471Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002543-hydroxy-2-methylpropanoateC4H7O3Chemical structure of 3-hydroxy-2-methylpropanoateNot available
Average103.098Da
Monoisotopic103.0400677Da
BASm00002583-(carbamoylamino)propanoateC4H7N2O3Chemical structure of 3-(carbamoylamino)propanoateNot available
Average131.112Da
Monoisotopic131.046215673Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm00002634-(hydroxymethyl)benzenesulfonateC7H7O4SChemical structure of 4-(hydroxymethyl)benzenesulfonateNot available
Average187.19Da
Monoisotopic187.007053459Da
BASm00002654-formylbenzenesulfonateC7H5O4SChemical structure of 4-formylbenzenesulfonateNot available
Average185.17Da
Monoisotopic184.991403395Da

Displaying 1–10 of 345 metabolites

Health Effects

No health effects information available for this bacterium.