Massilia sp. LC238

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Oxalobacteraceae

Genus

Massilia

Description

Massilia sp. LC238 is a Gram-negative, rod-shaped bacterium characterized by its single replicon. This organism has been cataloged under the accession number JNNN00000000.1, which provides a reference for its genomic data. The Gram-negative classification indicates that Massilia sp. LC238 possesses a thin peptidoglycan layer surrounded by an outer membrane, a characteristic that often influences its interactions with the environment, including susceptibility to antibiotics and its overall pathogenic potential. The rod shape of the bacterium is a common morphological feature that can be associated with various ecological roles, including nutrient cycling and interactions with other microorganisms. The presence of a single replicon suggests a streamlined genomic organization, which may contribute to its adaptability in diverse environments. This trait can facilitate efficient replication and maintenance of essential genetic information, potentially influencing the bacterium's survival and proliferation in various ecological niches. In summary, Massilia sp. LC238 exemplifies a Gram-negative, rod-shaped bacterium with a single replicon, which may play a role in its ecological adaptability. Understanding the genetic and morphological traits of such organisms can provide insights into their ecological functions and interactions within microbial communities.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyOxalobacteraceae
GenusMassilia
SpeciesMassilia sp. LC238
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Massilia sp. LC238
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Massilia sp. LC238 contig9, whole genome shotgun sequence.

Gene Summary

Adenine Count

1005303 bp

Thymine Count

1007959 bp

Guanine Count

1897694 bp

Cytosine Count

1888616 bp

Genome Length

5799572 bp

Protein-coding Genes

5087 genes

Non-Coding Genes

92 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
pyridoxamine 5'-phosphate oxidaseFG94_02988Not AvailablePositive3329240 - 333043345180.1
cyclopropane-fatty-acyl-phospholipid synthaseFG94_02989Not AvailablePositive3330495 - 333170345213.8
peptide methionine sulfoxide reductase msraFG94_02990Not AvailableNegative3331696 - 333223520118.8
hypothetical proteinFG94_02991Not AvailablePositive3332360 - 333286618195.4
short-chain alcohol dehydrogenaseFG94_02992Not AvailablePositive3333007 - 333384329390.0
putative transcriptional regulatorFG94_02993Not AvailablePositive3333886 - 333486335635.3
glutaryl-coa dehydrogenase gcdhFG94_02994Not AvailablePositive3335027 - 333622043716.4
diguanylate cyclase (ggdef) domain-containing proteinFG94_02995Not AvailablePositive3336398 - 333849777631.4
transcription factor jumonji jmjc domain-containing proteinFG94_02996Not AvailableNegative3338469 - 333938934040.0
smp-30/gluconolaconase/lre-like region-containing proteinFG94_02997Not AvailableNegative3339463 - 334035931928.8

Displaying genes 3011 – 3020 of 5179 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.