Massilia sp. LC238

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Oxalobacteraceae

Genus

Massilia

Description

Massilia sp. LC238 is a Gram-negative, rod-shaped bacterium characterized by its single replicon. This organism has been cataloged under the accession number JNNN00000000.1, which provides a reference for its genomic data. The Gram-negative classification indicates that Massilia sp. LC238 possesses a thin peptidoglycan layer surrounded by an outer membrane, a characteristic that often influences its interactions with the environment, including susceptibility to antibiotics and its overall pathogenic potential. The rod shape of the bacterium is a common morphological feature that can be associated with various ecological roles, including nutrient cycling and interactions with other microorganisms. The presence of a single replicon suggests a streamlined genomic organization, which may contribute to its adaptability in diverse environments. This trait can facilitate efficient replication and maintenance of essential genetic information, potentially influencing the bacterium's survival and proliferation in various ecological niches. In summary, Massilia sp. LC238 exemplifies a Gram-negative, rod-shaped bacterium with a single replicon, which may play a role in its ecological adaptability. Understanding the genetic and morphological traits of such organisms can provide insights into their ecological functions and interactions within microbial communities.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyOxalobacteraceae
GenusMassilia
SpeciesMassilia sp. LC238
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Massilia sp. LC238
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Massilia sp. LC238 contig9, whole genome shotgun sequence.

Gene Summary

Adenine Count

1005303 bp

Thymine Count

1007959 bp

Guanine Count

1897694 bp

Cytosine Count

1888616 bp

Genome Length

5799572 bp

Protein-coding Genes

5087 genes

Non-Coding Genes

92 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
integral membrane proteinFG94_01458Not AvailablePositive1632470 - 163425466430.3
dna mismatch repair protein muts domain-containing proteinFG94_01459Not AvailableNegative1634241 - 163582758282.8
transcriptional regulatorFG94_01460Not AvailableNegative1635863 - 163675632927.1
5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferaseFG94_01461Not AvailablePositive1636856 - 163912983712.1
ybhb/ybcl family raf kinase inhibitor-like proteinFG94_01462Not AvailablePositive1639266 - 164104163573.6
efflux transporter, rnd family, mfp subunitFG94_01463Not AvailablePositive1641271 - 164253945546.9
abc transporter atp-binding proteinFG94_01464Not AvailablePositive1642569 - 164327925970.4
putative abc transporter permease proteinFG94_01465Not AvailablePositive1643293 - 164460347891.0
putative abc transporter permease proteinFG94_01466Not AvailablePositive1644629 - 164586144260.9
sigma-54 dependent dna-binding response regulatorFG94_01467Not AvailablePositive1645892 - 164722347999.8

Displaying genes 1481 – 1490 of 5179 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.