Allobosea sp. LC85

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Alloboseaceae

Genus

Allobosea

Description

Allobosea sp. LC85 is a Gram-negative bacterium characterized by its rod shape. It possesses a single replicon, which is indicative of its genomic organization and replication strategy. The organism is cataloged under the accession number JPKG00000000.1, providing a reference point for further genomic studies. The Gram-negative classification of Allobosea sp. LC85 suggests that it has a unique cell wall structure, which typically includes an outer membrane containing lipopolysaccharides. This feature often influences the bacterium's interactions with its environment, including its response to antibiotics and its ability to survive in various ecological niches. The presence of a single replicon may point to a streamlined genetic makeup, potentially allowing for efficient replication and adaptation to changing conditions. Understanding the genetic and physiological traits of Allobosea sp. LC85 can provide insights into its ecological roles, particularly in its natural habitat. Overall, the traits of Allobosea sp. LC85 highlight its adaptability and potential significance in microbial communities. Further research could illuminate its interactions within ecosystems, possibly shedding light on its role in nutrient cycling or its relationships with other microorganisms.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyAlloboseaceae
GenusAllobosea
SpeciesAllobosea sp. LC85
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Bosea sp. LC85 contig9, whole genome shotgun sequence.

Gene Summary

Adenine Count

1155984 bp

Thymine Count

1144839 bp

Guanine Count

2119283 bp

Cytosine Count

2143923 bp

Genome Length

6564029 bp

Protein-coding Genes

6111 genes

Non-Coding Genes

137 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
putative tetratricopeptide domain proteinFG93_04663Not AvailableNegative4902190 - 490354248426.8
flagellar basal-body rod modification protein flgdFG93_04664Not AvailableNegative4903609 - 490395912226.9
inner membrane protein yqaaFG93_04665Not AvailableNegative4904087 - 490453315432.0
pantothenate kinaseFG93_04666Not AvailableNegative4904543 - 490555337853.6
phosphoribosyl-atp pyrophosphataseFG93_04667Not AvailableNegative4905627 - 490594711284.5
imidazole glycerol phosphate synthase subunit hisfFG93_04668Not AvailableNegative4905951 - 490682630966.6
hypothetical proteinFG93_04669Not AvailableNegative4907128 - 49073227209.75
carbonic anhydraseFG93_04670Not AvailablePositive4907365 - 490809625225.3
1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomeraseFG93_04671Not AvailableNegative4908101 - 490885626028.2
imidazole glycerol phosphate synthase subunit hishFG93_04672Not AvailableNegative4908844 - 490950023266.0

Displaying genes 4741 – 4750 of 6248 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.