Allobosea sp. LC85

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Alloboseaceae

Genus

Allobosea

Description

Allobosea sp. LC85 is a Gram-negative bacterium characterized by its rod shape. It possesses a single replicon, which is indicative of its genomic organization and replication strategy. The organism is cataloged under the accession number JPKG00000000.1, providing a reference point for further genomic studies. The Gram-negative classification of Allobosea sp. LC85 suggests that it has a unique cell wall structure, which typically includes an outer membrane containing lipopolysaccharides. This feature often influences the bacterium's interactions with its environment, including its response to antibiotics and its ability to survive in various ecological niches. The presence of a single replicon may point to a streamlined genetic makeup, potentially allowing for efficient replication and adaptation to changing conditions. Understanding the genetic and physiological traits of Allobosea sp. LC85 can provide insights into its ecological roles, particularly in its natural habitat. Overall, the traits of Allobosea sp. LC85 highlight its adaptability and potential significance in microbial communities. Further research could illuminate its interactions within ecosystems, possibly shedding light on its role in nutrient cycling or its relationships with other microorganisms.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyAlloboseaceae
GenusAllobosea
SpeciesAllobosea sp. LC85
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Bosea sp. LC85 contig9, whole genome shotgun sequence.

Gene Summary

Adenine Count

1155984 bp

Thymine Count

1144839 bp

Guanine Count

2119283 bp

Cytosine Count

2143923 bp

Genome Length

6564029 bp

Protein-coding Genes

6111 genes

Non-Coding Genes

137 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
branched-chain amino acid transport atp-binding proteinFG93_03193Not AvailableNegative3404547 - 340524825095.8
branched-chain amino acid transport atp-binding proteinFG93_03194Not AvailableNegative3405251 - 340600027325.2
abc transporter permease proteinFG93_03195Not AvailableNegative3405997 - 340693832957.5
high-affinity branched-chain amino acid transport system permease proteinFG93_03196Not AvailableNegative3406938 - 340783131051.2
abc-type transport system periplasmic substrate-binding proteinFG93_03197Not AvailableNegative3407987 - 340928847099.9
putative carnitine dehydratase/acyl-coa transferases-related proteinFG93_03198Not AvailablePositive3409537 - 341068240357.4
acyl-coa dehydrogenase, short-chain specificFG93_03199Not AvailablePositive3410698 - 341185242362.7
hypothetical proteinFG93_03200Not AvailablePositive3411854 - 341270530591.6
glutathione s-transferase domain proteinFG93_03201Not AvailableNegative3412709 - 341333522920.7
5'-nucleotidase domain protein precursorFG93_03202Not AvailablePositive3413625 - 341565872981.5

Displaying genes 3271 – 3280 of 6248 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.