Allobosea sp. LC85

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Alloboseaceae

Genus

Allobosea

Description

Allobosea sp. LC85 is a Gram-negative bacterium characterized by its rod shape. It possesses a single replicon, which is indicative of its genomic organization and replication strategy. The organism is cataloged under the accession number JPKG00000000.1, providing a reference point for further genomic studies. The Gram-negative classification of Allobosea sp. LC85 suggests that it has a unique cell wall structure, which typically includes an outer membrane containing lipopolysaccharides. This feature often influences the bacterium's interactions with its environment, including its response to antibiotics and its ability to survive in various ecological niches. The presence of a single replicon may point to a streamlined genetic makeup, potentially allowing for efficient replication and adaptation to changing conditions. Understanding the genetic and physiological traits of Allobosea sp. LC85 can provide insights into its ecological roles, particularly in its natural habitat. Overall, the traits of Allobosea sp. LC85 highlight its adaptability and potential significance in microbial communities. Further research could illuminate its interactions within ecosystems, possibly shedding light on its role in nutrient cycling or its relationships with other microorganisms.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyAlloboseaceae
GenusAllobosea
SpeciesAllobosea sp. LC85
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Bosea sp. LC85 contig9, whole genome shotgun sequence.

Gene Summary

Adenine Count

1155984 bp

Thymine Count

1144839 bp

Guanine Count

2119283 bp

Cytosine Count

2143923 bp

Genome Length

6564029 bp

Protein-coding Genes

6111 genes

Non-Coding Genes

137 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
opine oxidase subunit b (octopine oxidase subunit b)FG93_02423Not AvailablePositive2542357 - 254351439932.4
hypothetical proteinFG93_02424Not AvailablePositive2543511 - 25437748799.83
opine oxidase subunit a (octopine oxidase subunit a)FG93_02425Not AvailablePositive2543767 - 254505345111.8
putative aldehyde dehydrogenaseFG93_02426Not AvailablePositive2545057 - 254646349229.6
4-hydroxy-tetrahydrodipicolinate synthaseFG93_02427Not AvailablePositive2546489 - 254739731476.0
periplasmic component of amino acid abc-type transporter/signal transduction system precursorFG93_02428Not AvailablePositive2547520 - 254834729997.2
his/glu/gln/arg/opine family amino abc transporter permeaseFG93_02429Not AvailablePositive2548397 - 254905924269.1
abc-type polar amino acid transport system, atpase componentFG93_02430Not AvailablePositive2549073 - 254985227948.0
lysine 6-dehydrogenaseFG93_02431Not AvailablePositive2549845 - 255100841999.8
aspartate racemaseFG93_02432Not AvailablePositive2551005 - 255173925601.1

Displaying genes 2501 – 2510 of 6248 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.