Coprobacter secundus str. 177

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Barnesiellaceae

Genus

Coprobacter

Description

Coprobacter secundus str. 177 is a Gram-negative, rod-shaped bacterium characterized by a single replicon. This organism is part of the microbial community and can be studied through its genetic information, which is accessible via the accession JTDA00000000.2. The Gram-negative classification indicates that Coprobacter secundus str. 177 possesses a thin peptidoglycan layer surrounded by an outer membrane, which may influence its interactions with the environment and other microorganisms. The rod shape is a common morphology among many bacteria, often associated with specific growth patterns and ecological niches. The presence of only one replicon suggests a streamlined genetic architecture, which may reflect its adaptation to specific environmental conditions. Such characteristics can be significant in understanding the organism's role within its ecosystem, particularly in nutrient cycling and interactions with other microbial species. From a biological and ecological perspective, studying Coprobacter secundus str. 177 can provide insights into the diversity and complexity of microbiomes, particularly in relation to gut or soil ecosystems where such bacteria are often found. Understanding its traits and genetic makeup can shed light on its functional roles within these communities and its potential applications in biotechnology or environmental management.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyBarnesiellaceae
GenusCoprobacter
SpeciesCoprobacter secundus
Strain177

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Coprobacter secundus strain 177 30, whole genome shotgun sequence.

Gene Summary

Adenine Count

1276585 bp

Thymine Count

1298172 bp

Guanine Count

788538 bp

Cytosine Count

777477 bp

Genome Length

4140772 bp

Protein-coding Genes

3074 genes

Non-Coding Genes

60 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
atp-binding proteinPU94_004780Not AvailableNegative1210275 - 1212899100099.0
bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/gtp cyclohydrolase iiPU94_004785Not AvailableNegative1213126 - 121434345450.3
lptf/lptg family permeasePU94_004790Not AvailableNegative1214395 - 121635075774.3
start-like domain-containing proteinPU94_004795Not AvailableNegative1216469 - 121685514907.5
Trna-metNot AvailableNot AvailablePositive1217153 - 1217229Not Available
heparinase ii/iii family proteinPU94_004805Not AvailablePositive1217364 - 121921470676.7
gfo/idh/moca family proteinPU94_004810Not AvailableNegative1219215 - 122019536767.1
glycoside hydrolasePU94_004815Not AvailablePositive1220484 - 122269485118.0
two-component regulator propeller domain-containing proteinPU94_004820Not AvailableNegative1222954 - 1226973155544.0
hypothetical proteinPU94_004825Not AvailablePositive1227193 - 122791226732.6

Displaying genes 951 – 960 of 3134 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.