Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Barnesiellaceae
Genus
Coprobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Barnesiellaceae |
| Genus | Coprobacter |
| Species | Coprobacter secundus |
| Strain | 177 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276585 bp
Thymine Count
1298172 bp
Guanine Count
788538 bp
Cytosine Count
777477 bp
Genome Length
4140772 bp
Protein-coding Genes
3074 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 23s rrna (uracil(1939)-c(5))-methyltransferase rlmd | PU94_002510 | Not Available | Negative | 597863 - 599272 | 53808.1 |
| pyruvate, phosphate dikinase | PU94_002515 | Not Available | Positive | 599487 - 602204 | 99911.5 |
| helix-turn-helix domain-containing protein | PU94_002520 | Not Available | Negative | 602286 - 603158 | 33438.8 |
| efflux rnd transporter periplasmic adaptor subunit | PU94_002525 | Not Available | Positive | 603332 - 604360 | 38025.5 |
| efflux rnd transporter permease subunit | PU94_002530 | Not Available | Positive | 604357 - 607446 | 115574.0 |
| tolc family protein | PU94_002535 | Not Available | Positive | 607450 - 608751 | 49376.4 |
| glycerophosphodiester phosphodiesterase family protein | PU94_002540 | Not Available | Negative | 608808 - 609578 | 29254.5 |
| duf3078 domain-containing protein | PU94_002545 | Not Available | Negative | 609678 - 610505 | 31657.7 |
| hypothetical protein | PU94_002550 | Not Available | Positive | 610789 - 611232 | 17700.7 |
| winged helix dna-binding domain-containing protein | PU94_002555 | Not Available | Positive | 611355 - 612398 | 40095.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
