Coprobacter secundus str. 177

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Barnesiellaceae

Genus

Coprobacter

Description

Coprobacter secundus str. 177 is a Gram-negative, rod-shaped bacterium characterized by a single replicon. This organism is part of the microbial community and can be studied through its genetic information, which is accessible via the accession JTDA00000000.2. The Gram-negative classification indicates that Coprobacter secundus str. 177 possesses a thin peptidoglycan layer surrounded by an outer membrane, which may influence its interactions with the environment and other microorganisms. The rod shape is a common morphology among many bacteria, often associated with specific growth patterns and ecological niches. The presence of only one replicon suggests a streamlined genetic architecture, which may reflect its adaptation to specific environmental conditions. Such characteristics can be significant in understanding the organism's role within its ecosystem, particularly in nutrient cycling and interactions with other microbial species. From a biological and ecological perspective, studying Coprobacter secundus str. 177 can provide insights into the diversity and complexity of microbiomes, particularly in relation to gut or soil ecosystems where such bacteria are often found. Understanding its traits and genetic makeup can shed light on its functional roles within these communities and its potential applications in biotechnology or environmental management.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyBarnesiellaceae
GenusCoprobacter
SpeciesCoprobacter secundus
Strain177

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Coprobacter secundus strain 177 30, whole genome shotgun sequence.

Gene Summary

Adenine Count

1276585 bp

Thymine Count

1298172 bp

Guanine Count

788538 bp

Cytosine Count

777477 bp

Genome Length

4140772 bp

Protein-coding Genes

3074 genes

Non-Coding Genes

60 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
nucleotide exchange factor grpePU94_006040Not AvailablePositive1602337 - 160293622416.5
molecular chaperone dnajPU94_006045Not AvailablePositive1602956 - 160410741342.3
pp_01187PU94_006050Not AvailablePositive1604198 - 1605127Not Available
transglycosylase domain-containing proteinPU94_006055Not AvailableNegative1605096 - 160713878983.8
redoxin domain-containing proteinPU94_006060Not AvailableNegative1607216 - 160838244104.3
pyruvate formate-lyase-activating proteinPU94_006065Not AvailableNegative1608524 - 160925527719.8
formate c-acetyltransferasePU94_006070Not AvailableNegative1609272 - 161151284351.3
m64 family metallopeptidasePU94_006075Not AvailableNegative1611848 - 161318550980.1
glycoside hydrolase family 78 proteinPU94_006080Not AvailableNegative1613202 - 1615916103817.0
gh92 family glycosyl hydrolasePU94_006085Not AvailableNegative1615935 - 161820587060.1

Displaying genes 1201 – 1210 of 3134 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.