Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Barnesiellaceae
Genus
Coprobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Barnesiellaceae |
| Genus | Coprobacter |
| Species | Coprobacter secundus |
| Strain | 177 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276585 bp
Thymine Count
1298172 bp
Guanine Count
788538 bp
Cytosine Count
777477 bp
Genome Length
4140772 bp
Protein-coding Genes
3074 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor domain-containing protein | PU94_000540 | Not Available | Positive | 141053 - 143836 | 106406.0 |
| hypothetical protein | PU94_000545 | Not Available | Positive | 143871 - 145238 | 49977.2 |
| toxin-antitoxin system ywqk family antitoxin | PU94_000550 | Not Available | Positive | 145310 - 145777 | 18610.3 |
| asparagine synthase b | PU94_000555 | Not Available | Negative | 146025 - 147689 | 63405.7 |
| thioredoxin-like domain-containing protein | PU94_000560 | Not Available | Positive | 147947 - 149050 | 41423.6 |
| abc transporter permease | PU94_000565 | Not Available | Negative | 149079 - 150326 | 46998.8 |
| pyridoxal phosphate-dependent aminotransferase | PU94_000570 | Not Available | Negative | 150323 - 151522 | 44570.1 |
| yip1 family protein | PU94_000575 | Not Available | Positive | 151686 - 152249 | 21666.2 |
| ssra-binding protein | PU94_000580 | Not Available | Positive | 152265 - 152717 | 17396.2 |
| thump-like domain-containing protein | PU94_000585 | Not Available | Negative | 152728 - 153939 | 46869.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
