Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Barnesiellaceae
Genus
Coprobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Barnesiellaceae |
| Genus | Coprobacter |
| Species | Coprobacter secundus |
| Strain | 177 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276585 bp
Thymine Count
1298172 bp
Guanine Count
788538 bp
Cytosine Count
777477 bp
Genome Length
4140772 bp
Protein-coding Genes
3074 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phenylacetate--coa ligase family protein | PU94_000440 | Not Available | Positive | 108389 - 109690 | 49056.3 |
| amino acid-binding protein | PU94_000445 | Not Available | Positive | 109704 - 110129 | 15571.1 |
| outer membrane protein assembly factor bamd | PU94_000450 | Not Available | Positive | 110288 - 111091 | 31742.7 |
| dna-directed rna polymerase subunit omega | PU94_000455 | Not Available | Positive | 111104 - 111436 | 12792.1 |
| hypothetical protein | PU94_000460 | Not Available | Negative | 111744 - 112340 | 23394.1 |
| nickel-responsive transcriptional regulator nikr | PU94_000465 | Not Available | Positive | 112474 - 112875 | 15395.7 |
| tonb-dependent receptor plug domain-containing protein | PU94_000470 | Not Available | Positive | 113076 - 114950 | 69757.7 |
| carbamoyl-phosphate synthase (glutamine-hydrolyzing) large subunit | PU94_000475 | Not Available | Negative | 115023 - 118247 | 119959.0 |
| glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit | PU94_000480 | Not Available | Negative | 118277 - 119341 | 39995.4 |
| diaminopimelate epimerase | PU94_000485 | Not Available | Positive | 119688 - 120530 | 31113.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
