Palleronia abyssalis

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Roseobacteraceae

Genus

Palleronia

Description

Palleronia abyssalis is a Gram-negative bacterium characterized by its rod-shaped morphology. This species possesses a single replicon, which is indicative of its genetic organization. The genome of Palleronia abyssalis is accessible through the accession number ONZF00000000.1, providing a resource for further genomic studies and phylogenetic analyses. The classification of Palleronia abyssalis as Gram-negative indicates that it has a thin peptidoglycan layer surrounded by an outer membrane, which is a distinctive feature of this group of bacteria. This structural characteristic is significant as it often influences the bacterium's interactions with its environment, including its susceptibility to antibiotics and its role in various ecological niches. In terms of ecological insight, the specific traits of Palleronia abyssalis suggest that it may have adaptations suited for certain habitats, such as marine or deep-sea environments, as implied by its name ("abyssalis"). Gram-negative bacteria are often involved in nutrient cycling and can play crucial roles in biogeochemical processes. Therefore, Palleronia abyssalis may contribute to the microbial dynamics in its ecosystem, though further studies would be necessary to elucidate its specific ecological role.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyRoseobacteraceae
GenusPalleronia
SpeciesPalleronia abyssalis
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Palleronia abyssalis strain CECT 8504 genome assembly, contig:

Gene Summary

Adenine Count

794732 bp

Thymine Count

787425 bp

Guanine Count

1396726 bp

Cytosine Count

1425719 bp

Genome Length

4404602 bp

Protein-coding Genes

4299 genes

Non-Coding Genes

61 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinPAA8504_03998Not AvailablePositive3998596 - 399921922350.5
endolytic peptidoglycan transglycosylase rlpaPAA8504_03999Not AvailableNegative3999384 - 399977313681.1
2-dehydro-3-deoxygluconokinasePAA8504_04000Not AvailablePositive3999911 - 400080430891.7
mannonate dehydratasePAA8504_04001Not AvailableNegative4000801 - 400200043550.4
hypothetical proteinPAA8504_04002Not AvailablePositive4002129 - 400271622330.3
hth-type transcriptional regulator lutrPAA8504_04003Not AvailablePositive4002757 - 400347925961.1
methyl-accepting chemotaxis protein iiiPAA8504_04004Not AvailableNegative4003538 - 400571877033.1
hypothetical proteinPAA8504_04005Not AvailablePositive4005967 - 400628711620.6
4-deoxy-l-threo-5-hexosulose-uronate ketol-isomerase 1PAA8504_04006Not AvailablePositive4006305 - 400713230418.1
2-dehydro-3-deoxy-d-gluconate 5-dehydrogenasePAA8504_04007Not AvailablePositive4007129 - 400786024986.8

Displaying genes 3971 – 3980 of 4360 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.