Palleronia abyssalis

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Roseobacteraceae

Genus

Palleronia

Description

Palleronia abyssalis is a Gram-negative bacterium characterized by its rod-shaped morphology. This species possesses a single replicon, which is indicative of its genetic organization. The genome of Palleronia abyssalis is accessible through the accession number ONZF00000000.1, providing a resource for further genomic studies and phylogenetic analyses. The classification of Palleronia abyssalis as Gram-negative indicates that it has a thin peptidoglycan layer surrounded by an outer membrane, which is a distinctive feature of this group of bacteria. This structural characteristic is significant as it often influences the bacterium's interactions with its environment, including its susceptibility to antibiotics and its role in various ecological niches. In terms of ecological insight, the specific traits of Palleronia abyssalis suggest that it may have adaptations suited for certain habitats, such as marine or deep-sea environments, as implied by its name ("abyssalis"). Gram-negative bacteria are often involved in nutrient cycling and can play crucial roles in biogeochemical processes. Therefore, Palleronia abyssalis may contribute to the microbial dynamics in its ecosystem, though further studies would be necessary to elucidate its specific ecological role.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyRoseobacteraceae
GenusPalleronia
SpeciesPalleronia abyssalis
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Palleronia abyssalis strain CECT 8504 genome assembly, contig:

Gene Summary

Adenine Count

794732 bp

Thymine Count

787425 bp

Guanine Count

1396726 bp

Cytosine Count

1425719 bp

Genome Length

4404602 bp

Protein-coding Genes

4299 genes

Non-Coding Genes

61 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
acetyl-coenzyme a synthetasePAA8504_03736Not AvailablePositive3730688 - 373257168126.2
oligopeptide transport atp-binding protein oppfPAA8504_03737Not AvailableNegative3732662 - 373366637053.2
oligopeptide transport atp-binding protein oppdPAA8504_03738Not AvailableNegative3733663 - 373464335480.3
oligopeptide transport system permease protein oppcPAA8504_03739Not AvailableNegative3734643 - 373556333438.3
oligopeptide transport system permease protein oppbPAA8504_03740Not AvailableNegative3735574 - 373649733516.7
periplasmic murein peptide-binding proteinPAA8504_03741Not AvailableNegative3736556 - 373817260585.8
udp-n-acetylglucosamine 4-epimerasePAA8504_03742Not AvailablePositive3738384 - 373938837232.1
udp-glucose 4-epimerasePAA8504_03743Not AvailablePositive3739511 - 374052736816.5
putative oxidoreductasePAA8504_03744Not AvailableNegative3740532 - 374126626399.8
decaprenylphosphoryl-beta-d-ribose oxidasePAA8504_03745Not AvailableNegative3741263 - 374257046924.5

Displaying genes 3711 – 3720 of 4360 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.