Campylobacter sp. RM16704

Kingdom

Pseudomonadati

Phylum

Campylobacterota

Class

Epsilonproteobacteria

Order

Campylobacterales

Family

Campylobacteraceae

Genus

Campylobacter

Description

Campylobacter sp. RM16704 is characterized by having a single replicon, which suggests a streamlined genomic organization typical of many Campylobacter species. This bacterium is cataloged under the accession number NZ_CP007769.1, providing a reference for its genomic sequence and associated research. Campylobacter species, including RM16704, are known for their role in foodborne illnesses, often associated with poultry and other livestock. Their characteristic spiral shape and motility, facilitated by flagella, enable them to colonize the intestinal tracts of various hosts, including humans. The single replicon feature may contribute to the organism's adaptability and efficiency in resource utilization, crucial for survival in competitive environments. Understanding the traits of Campylobacter sp. RM16704 can offer insights into its ecological niche and pathogenic potential. The streamlined genomic structure may reflect evolutionary adaptations to specific environments, potentially influencing its interactions with host organisms and its ability to survive in varied ecological conditions. Overall, the study of this strain contributes to the broader understanding of Campylobacter species and their significance in microbiological research and public health.

Taxonomy

KingdomPseudomonadati
PhylumCampylobacterota
ClassEpsilonproteobacteria
OrderCampylobacterales
FamilyCampylobacteraceae
GenusCampylobacter
SpeciesCampylobacter sp. RM16704
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Campylobacter sp. RM16704
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Campylobacter sp. RM16704


Gene Summary

Adenine Count

559140 bp

Thymine Count

554983 bp

Guanine Count

222878 bp

Cytosine Count

220535 bp

Genome Length

1557536 bp

Protein-coding Genes

1541 genes

Non-Coding Genes

58 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
lytic transglycosylase domain-containing proteinCAQ16704_RS07900Not AvailablePositive10703 - 1128122566.9
filamentous hemagglutinin n-terminal domain-containing proteinCAQ16704_RS07905Not AvailablePositive11491 - 14241100695.0
peptide chain release factor 1CAQ16704_RS00065Not AvailableNegative14419 - 1548639967.6
30s ribosomal protein s20CAQ16704_RS00070Not AvailableNegative15491 - 157549917.13
pseudouridine synthaseCAQ16704_RS00075Not AvailableNegative15842 - 1660329179.5
hypothetical proteinCAQ16704_RS00080Not AvailableNegative16623 - 1794252044.7
ribonuclease jCAQ16704_RS00085Not AvailableNegative17994 - 1995274337.8
16s rrna (adenine(1518)-n(6)/adenine(1519)-n(6))- dimethyltransferase rsmaCAQ16704_RS00090Not AvailableNegative19912 - 2073931471.1
purine-nucleoside phosphorylaseCAQ16704_RS00095Not AvailablePositive20831 - 2136419864.0
23s rrna (adenine(2503)-c(2))-methyltransferase rlmnCAQ16704_RS00100Not AvailablePositive21373 - 2244340475.6

Displaying genes 11 – 20 of 1599 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.