Pseudomonas sp. Snoq117.2

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas sp. Snoq117.2 is a bacterial strain characterized by a single replicon, indicating it possesses a singular circular chromosome. The strain is cataloged with the accession number FOED00000000.1, which serves as a reference for genetic information and further research. Pseudomonas species are known for their metabolic versatility and ability to thrive in diverse environments, including soil, water, and plant surfaces. This adaptability often allows them to play critical roles in biogeochemical cycles and contribute to nutrient cycling. Given that Snoq117.2 falls within this genus, it may possess similar ecological roles. While specific traits such as pathogenicity, antibiotic resistance, or symbiotic relationships for Pseudomonas sp. Snoq117.2 have not been provided, other members of the Pseudomonas genus are recognized for their ability to degrade organic pollutants, which suggests that Snoq117.2 could potentially be involved in bioremediation processes. This ecological insight underscores the importance of studying various Pseudomonas strains, as they may offer solutions for environmental challenges. Further investigation into the specific metabolic pathways and ecological functions of Pseudomonas sp. Snoq117.2 is warranted to understand its potential contributions to its ecosystem.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. Snoq117.2
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. Snoq117.2
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. Snoq117.2 genome assembly, contig: Ga0007974_149,

Gene Summary

Adenine Count

976754 bp

Thymine Count

971535 bp

Guanine Count

1780629 bp

Cytosine Count

1811423 bp

Genome Length

5543492 bp

Protein-coding Genes

5037 genes

Non-Coding Genes

173 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
uncharacterized membrane protein yeihSAMN02787149_11234Not AvailablePositive4587155 - 458777221852.5
zn-binding pro-ala-ala-arg (paar) domain-containing protein, incolved in typevi secretionSAMN02787149_11235Not AvailablePositive4587870 - 458974166517.1
protein of unknown functionSAMN02787149_11236Not AvailablePositive4589738 - 459042425251.9
epoxyqueuosine reductaseSAMN02787149_11237Not AvailableNegative4590441 - 459150539596.5
nad(p)h-hydrate epimeraseSAMN02787149_11238Not AvailablePositive4591567 - 459305450575.2
trna threonylcarbamoyladenosine biosynthesis protein tsaeSAMN02787149_11239Not AvailablePositive4593042 - 459350316519.7
n-acetylmuramoyl-l-alanine amidaseSAMN02787149_11240Not AvailablePositive4593542 - 459497251138.4
dna mismatch repair protein mutlSAMN02787149_11241Not AvailablePositive4594965 - 459686069322.7
trna dimethylallyltransferaseSAMN02787149_11242Not AvailablePositive4596903 - 459788335294.7
rna-binding protein hfqSAMN02787149_11243Not AvailablePositive4597971 - 45982169118.96

Displaying genes 4281 – 4290 of 5210 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.