Pseudomonas sp. Snoq117.2

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas sp. Snoq117.2 is a bacterial strain characterized by a single replicon, indicating it possesses a singular circular chromosome. The strain is cataloged with the accession number FOED00000000.1, which serves as a reference for genetic information and further research. Pseudomonas species are known for their metabolic versatility and ability to thrive in diverse environments, including soil, water, and plant surfaces. This adaptability often allows them to play critical roles in biogeochemical cycles and contribute to nutrient cycling. Given that Snoq117.2 falls within this genus, it may possess similar ecological roles. While specific traits such as pathogenicity, antibiotic resistance, or symbiotic relationships for Pseudomonas sp. Snoq117.2 have not been provided, other members of the Pseudomonas genus are recognized for their ability to degrade organic pollutants, which suggests that Snoq117.2 could potentially be involved in bioremediation processes. This ecological insight underscores the importance of studying various Pseudomonas strains, as they may offer solutions for environmental challenges. Further investigation into the specific metabolic pathways and ecological functions of Pseudomonas sp. Snoq117.2 is warranted to understand its potential contributions to its ecosystem.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. Snoq117.2
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. Snoq117.2
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. Snoq117.2 genome assembly, contig: Ga0007974_149,

Gene Summary

Adenine Count

976754 bp

Thymine Count

971535 bp

Guanine Count

1780629 bp

Cytosine Count

1811423 bp

Genome Length

5543492 bp

Protein-coding Genes

5037 genes

Non-Coding Genes

173 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ssu ribosomal protein s20pSAMN02787149_107136Not AvailableNegative3888161 - 388843910048.3
putative peptidoglycan lipid ii flippaseSAMN02787149_107137Not AvailablePositive3888683 - 389022155914.5
riboflavin kinase / fmn adenylyltransferaseSAMN02787149_107138Not AvailablePositive3890301 - 389124834829.1
isoleucyl-trna synthetaseSAMN02787149_107139Not AvailablePositive3891250 - 3894084105161.0
signal peptidase iiSAMN02787149_107140Not AvailablePositive3894077 - 389458018889.1
fkbp-type peptidyl-prolyl cis-trans isomerase slpaSAMN02787149_107141Not AvailablePositive3894573 - 389501915822.7
4-hydroxy-3-methylbut-2-enyl diphosphate reductaseSAMN02787149_107142Not AvailablePositive3895054 - 389599834384.9
type iv pilus assembly protein pileSAMN02787149_107143Not AvailableNegative3896014 - 389647216394.6
type iv pilus assembly protein pily1SAMN02787149_107144Not AvailableNegative3896475 - 3900374140211.0
type iv pilus assembly protein pilxSAMN02787149_107145Not AvailableNegative3900389 - 390087416927.4

Displaying genes 3661 – 3670 of 5210 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.