Pseudomonas sp. Snoq117.2

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas sp. Snoq117.2 is a bacterial strain characterized by a single replicon, indicating it possesses a singular circular chromosome. The strain is cataloged with the accession number FOED00000000.1, which serves as a reference for genetic information and further research. Pseudomonas species are known for their metabolic versatility and ability to thrive in diverse environments, including soil, water, and plant surfaces. This adaptability often allows them to play critical roles in biogeochemical cycles and contribute to nutrient cycling. Given that Snoq117.2 falls within this genus, it may possess similar ecological roles. While specific traits such as pathogenicity, antibiotic resistance, or symbiotic relationships for Pseudomonas sp. Snoq117.2 have not been provided, other members of the Pseudomonas genus are recognized for their ability to degrade organic pollutants, which suggests that Snoq117.2 could potentially be involved in bioremediation processes. This ecological insight underscores the importance of studying various Pseudomonas strains, as they may offer solutions for environmental challenges. Further investigation into the specific metabolic pathways and ecological functions of Pseudomonas sp. Snoq117.2 is warranted to understand its potential contributions to its ecosystem.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. Snoq117.2
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. Snoq117.2
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. Snoq117.2 genome assembly, contig: Ga0007974_149,

Gene Summary

Adenine Count

976754 bp

Thymine Count

971535 bp

Guanine Count

1780629 bp

Cytosine Count

1811423 bp

Genome Length

5543492 bp

Protein-coding Genes

5037 genes

Non-Coding Genes

173 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
two-component system, ntrc family, c4-dicarboxylate transport sensor histidine kinase dctbSAMN02787149_106243Not AvailablePositive3677845 - 367961163995.5
two-component system, ntrc family, c4-dicarboxylate transport response regulator dctdSAMN02787149_106244Not AvailablePositive3679765 - 368109048348.4
mfs transporter, mhs family, alpha-ketoglutarate permeaseSAMN02787149_106245Not AvailablePositive3681261 - 368256847413.5
hypothetical proteinSAMN02787149_106246Not AvailablePositive3682744 - 368305211389.3
dna topoisomerase-3SAMN02787149_106247Not AvailableNegative3683244 - 368519671582.5
hypothetical proteinSAMN02787149_106248Not AvailablePositive3685440 - 36856317007.32
lysr family transcriptional regulator, glycine cleavage system transcriptional activatorSAMN02787149_106249Not AvailableNegative3685650 - 368655533615.2
glutathione s-transferaseSAMN02787149_106250Not AvailablePositive3686711 - 368732522785.7
aminomethyltransferaseSAMN02787149_106251Not AvailableNegative3687413 - 368852239533.8
glycine dehydrogenaseSAMN02787149_106252Not AvailableNegative3688667 - 3691522102564.0

Displaying genes 3481 – 3490 of 5210 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.