Pseudomonas sp. Snoq117.2

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas sp. Snoq117.2 is a bacterial strain characterized by a single replicon, indicating it possesses a singular circular chromosome. The strain is cataloged with the accession number FOED00000000.1, which serves as a reference for genetic information and further research. Pseudomonas species are known for their metabolic versatility and ability to thrive in diverse environments, including soil, water, and plant surfaces. This adaptability often allows them to play critical roles in biogeochemical cycles and contribute to nutrient cycling. Given that Snoq117.2 falls within this genus, it may possess similar ecological roles. While specific traits such as pathogenicity, antibiotic resistance, or symbiotic relationships for Pseudomonas sp. Snoq117.2 have not been provided, other members of the Pseudomonas genus are recognized for their ability to degrade organic pollutants, which suggests that Snoq117.2 could potentially be involved in bioremediation processes. This ecological insight underscores the importance of studying various Pseudomonas strains, as they may offer solutions for environmental challenges. Further investigation into the specific metabolic pathways and ecological functions of Pseudomonas sp. Snoq117.2 is warranted to understand its potential contributions to its ecosystem.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. Snoq117.2
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. Snoq117.2
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. Snoq117.2 genome assembly, contig: Ga0007974_149,

Gene Summary

Adenine Count

976754 bp

Thymine Count

971535 bp

Guanine Count

1780629 bp

Cytosine Count

1811423 bp

Genome Length

5543492 bp

Protein-coding Genes

5037 genes

Non-Coding Genes

173 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
type iv pilus assembly protein pilqSAMN02787149_104276Not AvailableNegative2836390 - 283863980071.6
type iv pilus assembly protein pilpSAMN02787149_104277Not AvailableNegative2838639 - 283915718790.6
type iv pilus assembly protein piloSAMN02787149_104278Not AvailableNegative2839154 - 283980723973.9
type iv pilus assembly protein pilnSAMN02787149_104279Not AvailableNegative2839804 - 284039121770.4
type iv pilus assembly protein pilmSAMN02787149_104280Not AvailableNegative2840392 - 284145637825.4
penicillin-binding protein 1aSAMN02787149_104281Not AvailablePositive2841624 - 284404489029.9
malate dehydrogenase (oxaloacetate-decarboxylating)(nadp+)SAMN02787149_104282Not AvailableNegative2844099 - 284536745189.5
endonuclease yncb, thermonuclease familySAMN02787149_104283Not AvailableNegative2845480 - 284630730228.2
lsu ribosomal protein l31pSAMN02787149_104284Not AvailableNegative2846307 - 28465227906.46
replication restart dna helicase priaSAMN02787149_104285Not AvailablePositive2846680 - 284889382465.0

Displaying genes 2681 – 2690 of 5210 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.