Pseudomonas sp. Snoq117.2

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas sp. Snoq117.2 is a bacterial strain characterized by a single replicon, indicating it possesses a singular circular chromosome. The strain is cataloged with the accession number FOED00000000.1, which serves as a reference for genetic information and further research. Pseudomonas species are known for their metabolic versatility and ability to thrive in diverse environments, including soil, water, and plant surfaces. This adaptability often allows them to play critical roles in biogeochemical cycles and contribute to nutrient cycling. Given that Snoq117.2 falls within this genus, it may possess similar ecological roles. While specific traits such as pathogenicity, antibiotic resistance, or symbiotic relationships for Pseudomonas sp. Snoq117.2 have not been provided, other members of the Pseudomonas genus are recognized for their ability to degrade organic pollutants, which suggests that Snoq117.2 could potentially be involved in bioremediation processes. This ecological insight underscores the importance of studying various Pseudomonas strains, as they may offer solutions for environmental challenges. Further investigation into the specific metabolic pathways and ecological functions of Pseudomonas sp. Snoq117.2 is warranted to understand its potential contributions to its ecosystem.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. Snoq117.2
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. Snoq117.2
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. Snoq117.2 genome assembly, contig: Ga0007974_149,

Gene Summary

Adenine Count

976754 bp

Thymine Count

971535 bp

Guanine Count

1780629 bp

Cytosine Count

1811423 bp

Genome Length

5543492 bp

Protein-coding Genes

5037 genes

Non-Coding Genes

173 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
4-hydroxy-tetrahydrodipicolinate synthaseSAMN02787149_103133Not AvailablePositive2126525 - 212744533092.8
5-(carboxyamino)imidazole ribonucleotide mutaseSAMN02787149_103134Not AvailablePositive2127778 - 212827217076.7
5-(carboxyamino)imidazole ribonucleotide synthaseSAMN02787149_103135Not AvailablePositive2128269 - 212935138478.0
uncharacterized membrane protein yeaq/ymge, transglycosylase-associated protein familySAMN02787149_103136Not AvailablePositive2129480 - 21297288511.0
hypothetical proteinSAMN02787149_103137Not AvailablePositive2130039 - 213058719816.8
glutaredoxinSAMN02787149_103138Not AvailableNegative2130684 - 213106114285.4
uracil-dna glycosylaseSAMN02787149_103139Not AvailablePositive2131203 - 213187125381.3
reverse transcriptase (rna-dependent dna polymerase)SAMN02787149_103140Not AvailableNegative2132116 - 213411076739.3
reverse transcriptase (rna-dependent dna polymerase)SAMN02787149_103141Not AvailableNegative2134103 - 213532646939.9
dna repair protein radcSAMN02787149_103142Not AvailableNegative2135444 - 213611824727.8

Displaying genes 2041 – 2050 of 5210 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.