Burkholderia sp. WP9

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Burkholderiaceae

Genus

Burkholderia

Description

Burkholderia sp. WP9 is characterized by having a single replicon, which is significant for its genomic organization and stability. The genome of this strain is cataloged under the accession number FNTG00000000.1, indicating its availability for further research and analysis. Burkholderia species are known for their diverse ecological roles, which include their ability to thrive in various environments, often exhibiting plant-beneficial traits and potential biocontrol properties. While specific ecological interactions of Burkholderia sp. WP9 are not detailed in the provided information, the genus Burkholderia is generally associated with interactions that can be beneficial in agricultural settings, such as promoting plant growth and suppressing pathogens. Given its classification and single replicon structure, Burkholderia sp. WP9 may demonstrate unique metabolic capabilities, potentially impacting nutrient cycling and plant health in its native ecosystem. The presence of a single replicon can suggest a streamlined genetic framework, which may contribute to the strain's adaptability and efficiency in various ecological niches. In summary, the genomic characteristics of Burkholderia sp. WP9 emphasize its potential role in ecological and agricultural systems, particularly in terms of plant interactions and environmental adaptability.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyBurkholderiaceae
GenusBurkholderia
SpeciesBurkholderia sp. WP9
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Burkholderia sp. WP9 genome assembly, contig: Ga0008007_17, whole

Gene Summary

Adenine Count

1710066 bp

Thymine Count

1710860 bp

Guanine Count

2804212 bp

Cytosine Count

2798395 bp

Genome Length

9023533 bp

Protein-coding Genes

7904 genes

Non-Coding Genes

108 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
naphthalene 1,2-dioxygenase system ferredoxin subunitSAMN02787142_7585Not AvailablePositive8346110 - 834642111297.4
gentisate 1,2-dioxygenaseSAMN02787142_7586Not AvailablePositive8346568 - 834761438771.8
fumarylpyruvate hydrolaseSAMN02787142_7587Not AvailablePositive8347645 - 834834325470.4
maleylacetoacetate isomeraseSAMN02787142_7588Not AvailablePositive8348366 - 834903424815.4
transcriptional regulator, lysr familySAMN02787142_7589Not AvailablePositive8349233 - 835017434913.0
dna-binding transcriptional regulator, lysr familySAMN02787142_7590Not AvailableNegative8350254 - 835115932929.5
transposase, is5 familySAMN02787142_7591Not AvailablePositive8351263 - 835224036632.2
efflux transporter, outer membrane factor (omf) lipoprotein, nodt familySAMN02787142_7592Not AvailablePositive8352488 - 835401754515.3
uncharacterized membrane protein ycccSAMN02787142_7593Not AvailablePositive8354014 - 835624281443.3
protein of unknown functionSAMN02787142_7594Not AvailablePositive8356232 - 83564297332.36

Displaying genes 7371 – 7380 of 8012 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.