Burkholderia sp. WP9

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Burkholderiaceae

Genus

Burkholderia

Description

Burkholderia sp. WP9 is characterized by having a single replicon, which is significant for its genomic organization and stability. The genome of this strain is cataloged under the accession number FNTG00000000.1, indicating its availability for further research and analysis. Burkholderia species are known for their diverse ecological roles, which include their ability to thrive in various environments, often exhibiting plant-beneficial traits and potential biocontrol properties. While specific ecological interactions of Burkholderia sp. WP9 are not detailed in the provided information, the genus Burkholderia is generally associated with interactions that can be beneficial in agricultural settings, such as promoting plant growth and suppressing pathogens. Given its classification and single replicon structure, Burkholderia sp. WP9 may demonstrate unique metabolic capabilities, potentially impacting nutrient cycling and plant health in its native ecosystem. The presence of a single replicon can suggest a streamlined genetic framework, which may contribute to the strain's adaptability and efficiency in various ecological niches. In summary, the genomic characteristics of Burkholderia sp. WP9 emphasize its potential role in ecological and agricultural systems, particularly in terms of plant interactions and environmental adaptability.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyBurkholderiaceae
GenusBurkholderia
SpeciesBurkholderia sp. WP9
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Burkholderia sp. WP9 genome assembly, contig: Ga0008007_17, whole

Gene Summary

Adenine Count

1710066 bp

Thymine Count

1710860 bp

Guanine Count

2804212 bp

Cytosine Count

2798395 bp

Genome Length

9023533 bp

Protein-coding Genes

7904 genes

Non-Coding Genes

108 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
pas domain s-box-containing protein/diguanylate cyclase (ggdef) domain-containing proteinSAMN02787142_6030Not AvailablePositive6620186 - 662112435269.2
farnesyl-diphosphate farnesyltransferaseSAMN02787142_6031Not AvailablePositive6621398 - 662224631465.8
squalene-associated fad-dependent desaturaseSAMN02787142_6032Not AvailablePositive6622251 - 662351945019.5
squalene-hopene/tetraprenyl-beta-curcumene cyclaseSAMN02787142_6033Not AvailablePositive6623516 - 662554675006.3
hopanoid-associated phosphorylaseSAMN02787142_6034Not AvailablePositive6625550 - 662628124899.2
phospholipid-binding lipoprotein mlaaSAMN02787142_6035Not AvailableNegative6626352 - 662736834641.5
hypothetical proteinSAMN02787142_6036Not AvailableNegative6627371 - 662998692824.6
abc-type transporter mla maintaining outer membrane lipid asymmetry, mlac componentSAMN02787142_6037Not AvailablePositive6630199 - 663080421823.2
hopanoid biosynthesis associated radical sam protein hpnhSAMN02787142_6038Not AvailableNegative6630953 - 663210743094.9
4-hydroxy-3-methylbut-2-enyl diphosphate reductaseSAMN02787142_6039Not AvailableNegative6632118 - 663306233821.5

Displaying genes 5861 – 5870 of 8012 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.