Burkholderia sp. WP9

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Burkholderiaceae

Genus

Burkholderia

Description

Burkholderia sp. WP9 is characterized by having a single replicon, which is significant for its genomic organization and stability. The genome of this strain is cataloged under the accession number FNTG00000000.1, indicating its availability for further research and analysis. Burkholderia species are known for their diverse ecological roles, which include their ability to thrive in various environments, often exhibiting plant-beneficial traits and potential biocontrol properties. While specific ecological interactions of Burkholderia sp. WP9 are not detailed in the provided information, the genus Burkholderia is generally associated with interactions that can be beneficial in agricultural settings, such as promoting plant growth and suppressing pathogens. Given its classification and single replicon structure, Burkholderia sp. WP9 may demonstrate unique metabolic capabilities, potentially impacting nutrient cycling and plant health in its native ecosystem. The presence of a single replicon can suggest a streamlined genetic framework, which may contribute to the strain's adaptability and efficiency in various ecological niches. In summary, the genomic characteristics of Burkholderia sp. WP9 emphasize its potential role in ecological and agricultural systems, particularly in terms of plant interactions and environmental adaptability.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyBurkholderiaceae
GenusBurkholderia
SpeciesBurkholderia sp. WP9
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Burkholderia sp. WP9 genome assembly, contig: Ga0008007_17, whole

Gene Summary

Adenine Count

1710066 bp

Thymine Count

1710860 bp

Guanine Count

2804212 bp

Cytosine Count

2798395 bp

Genome Length

9023533 bp

Protein-coding Genes

7904 genes

Non-Coding Genes

108 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
gluconate 2-dehydrogenase alpha chainSAMN02787142_5408Not AvailablePositive5901451 - 590322365173.4
cytochrome c, mono-and diheme variantsSAMN02787142_5409Not AvailablePositive5903226 - 590457847225.3
predicted metal-dependent hydrolase, tim-barrel foldSAMN02787142_5410Not AvailableNegative5904675 - 590549930651.8
sugar phosphate isomerase/epimeraseSAMN02787142_5411Not AvailableNegative5905496 - 590634429813.9
3-oxoacyl-[acyl-carrier protein] reductaseSAMN02787142_5412Not AvailableNegative5906341 - 590708126025.3
mfs transporter, acs family, d-galactonate transporterSAMN02787142_5413Not AvailableNegative5907101 - 590843247933.1
dna-binding transcriptional regulator, lysr familySAMN02787142_5414Not AvailablePositive5908622 - 590953633296.0
gluconate 5-dehydrogenaseSAMN02787142_5415Not AvailableNegative5909576 - 591034927489.8
gluconokinaseSAMN02787142_5416Not AvailableNegative5910351 - 591094721818.0
amino acid abc transporter substrate-binding protein, paat familySAMN02787142_5417Not AvailableNegative5911005 - 591185329969.3

Displaying genes 5261 – 5270 of 8012 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.