Burkholderia sp. WP9

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Burkholderiaceae

Genus

Burkholderia

Description

Burkholderia sp. WP9 is characterized by having a single replicon, which is significant for its genomic organization and stability. The genome of this strain is cataloged under the accession number FNTG00000000.1, indicating its availability for further research and analysis. Burkholderia species are known for their diverse ecological roles, which include their ability to thrive in various environments, often exhibiting plant-beneficial traits and potential biocontrol properties. While specific ecological interactions of Burkholderia sp. WP9 are not detailed in the provided information, the genus Burkholderia is generally associated with interactions that can be beneficial in agricultural settings, such as promoting plant growth and suppressing pathogens. Given its classification and single replicon structure, Burkholderia sp. WP9 may demonstrate unique metabolic capabilities, potentially impacting nutrient cycling and plant health in its native ecosystem. The presence of a single replicon can suggest a streamlined genetic framework, which may contribute to the strain's adaptability and efficiency in various ecological niches. In summary, the genomic characteristics of Burkholderia sp. WP9 emphasize its potential role in ecological and agricultural systems, particularly in terms of plant interactions and environmental adaptability.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyBurkholderiaceae
GenusBurkholderia
SpeciesBurkholderia sp. WP9
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Burkholderia sp. WP9 genome assembly, contig: Ga0008007_17, whole

Gene Summary

Adenine Count

1710066 bp

Thymine Count

1710860 bp

Guanine Count

2804212 bp

Cytosine Count

2798395 bp

Genome Length

9023533 bp

Protein-coding Genes

7904 genes

Non-Coding Genes

108 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
amino acid/amide abc transporter substrate-binding protein, haat familySAMN02787142_2419Not AvailablePositive2661717 - 266293443187.8
amino acid/amide abc transporter membrane protein 1, haat familySAMN02787142_2420Not AvailablePositive2663031 - 266390630294.4
amino acid/amide abc transporter membrane protein 2, haat family /amino acid/amide abc transporter atp-binding protein 1, haat familySAMN02787142_2421Not AvailablePositive2663915 - 266585569197.8
amino acid/amide abc transporter atp-binding protein 2, haat familySAMN02787142_2422Not AvailablePositive2665885 - 266661926046.0
camp-binding domain of crp or a regulatory subunit of camp-dependent protein kinasesSAMN02787142_2426Not AvailableNegative2668449 - 266918327085.8
transposase, is4 familySAMN02787142_2428Not AvailablePositive2671147 - 267212436632.2
methyl-accepting chemotaxis sensory transducer /methyl-accepting chemotaxis sensory transducer with tarh sensorSAMN02787142_2429Not AvailableNegative2672630 - 267417754440.7
udp-n-acetylmuramyl pentapeptide phosphotransferase/udp-n-acetylglucosamine-1-phosphate transferaseSAMN02787142_2430Not AvailablePositive2674449 - 267554940553.2
nuclease-related domain-containing proteinSAMN02787142_2431Not AvailableNegative2675486 - 267630130163.4
hypothetical proteinSAMN02787142_2432Not AvailableNegative2676365 - 267698823703.5

Displaying genes 2371 – 2380 of 8012 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.