Mesotoga sp. SC_NapDC

rod

Kingdom

Thermotogati

Phylum

Thermotogota

Class

Thermotogae

Order

Kosmotogales

Family

Kosmotogaceae

Genus

Mesotoga

Description

Mesotoga sp. SC_NapDC is a Gram-negative, rod-shaped bacterium characterized by its unique genomic and morphological traits. It possesses a single replicon, which is notable for its simplicity compared to other bacterial species that may have multiple replicons. The genome of Mesotoga sp. SC_NapDC is cataloged under the accession number JNFM00000000.1, providing a reference for further genetic and genomic studies. The Gram-negative classification indicates that Mesotoga sp. SC_NapDC has a thin peptidoglycan layer surrounded by an outer membrane, which is a hallmark of this group of bacteria. This structural feature often contributes to the bacterium's sensitivity to certain antibiotics and its overall ecological interactions. The rod shape of Mesotoga sp. SC_NapDC is typical of many bacteria within its taxonomic realm, facilitating mobility and the ability to colonize various environments. This morphology often plays a role in the bacterium's ecological niches, as rod-shaped cells can efficiently navigate through liquid environments and may be better suited for attachment to surfaces, influencing their ecological roles. In summary, Mesotoga sp. SC_NapDC's Gram-negative nature, combined with its single-replicon genome and rod shape, suggests a potential for adaptability in diverse environments. Understanding these traits can provide insights into the ecological significance and evolutionary strategies of this bacterium within its natural habitat.

Taxonomy

KingdomThermotogati
PhylumThermotogota
ClassThermotogae
OrderKosmotogales
FamilyKosmotogaceae
GenusMesotoga
SpeciesMesotoga sp. SC_NapDC
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Mesotoga sp. SC_NapDC NapDC_c556, whole genome shotgun sequence.

Gene Summary

Adenine Count

765744 bp

Thymine Count

770495 bp

Guanine Count

661624 bp

Cytosine Count

640843 bp

Genome Length

2839777 bp

Protein-coding Genes

2481 genes

Non-Coding Genes

46 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
asparagine--trna ligaseEU77_04775Not AvailableNegative886819 - 88811749653.3
s-layer proteinEU77_04780Not AvailableNegative888206 - 88994562796.8
aspartyl-trna synthetaseEU77_04785Not AvailablePositive890051 - 89181766532.4
4-hydroxy-3-methylbut-2-enyl diphosphate reductaseEU77_04790Not AvailablePositive891820 - 89334356055.3
30s ribosomal protein s1EU77_04795Not AvailablePositive893315 - 89503063930.1
gtp-binding protein derEU77_04800Not AvailablePositive895030 - 89635549243.4
glycerol-3-phosphate acyltransferaseEU77_04805Not AvailablePositive896352 - 89696021809.5
hypothetical proteinEU77_04810Not AvailableNegative896957 - 89734914690.0
atp synthase f1 subunit epsilonEU77_04815Not AvailableNegative897420 - 89781815037.1
atp f0f1 synthase subunit betaEU77_04820Not AvailableNegative897820 - 89924151973.3

Displaying genes 841 – 850 of 2527 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.