Mesotoga sp. SC_NapDC

rod

Kingdom

Thermotogati

Phylum

Thermotogota

Class

Thermotogae

Order

Kosmotogales

Family

Kosmotogaceae

Genus

Mesotoga

Description

Mesotoga sp. SC_NapDC is a Gram-negative, rod-shaped bacterium characterized by its unique genomic and morphological traits. It possesses a single replicon, which is notable for its simplicity compared to other bacterial species that may have multiple replicons. The genome of Mesotoga sp. SC_NapDC is cataloged under the accession number JNFM00000000.1, providing a reference for further genetic and genomic studies. The Gram-negative classification indicates that Mesotoga sp. SC_NapDC has a thin peptidoglycan layer surrounded by an outer membrane, which is a hallmark of this group of bacteria. This structural feature often contributes to the bacterium's sensitivity to certain antibiotics and its overall ecological interactions. The rod shape of Mesotoga sp. SC_NapDC is typical of many bacteria within its taxonomic realm, facilitating mobility and the ability to colonize various environments. This morphology often plays a role in the bacterium's ecological niches, as rod-shaped cells can efficiently navigate through liquid environments and may be better suited for attachment to surfaces, influencing their ecological roles. In summary, Mesotoga sp. SC_NapDC's Gram-negative nature, combined with its single-replicon genome and rod shape, suggests a potential for adaptability in diverse environments. Understanding these traits can provide insights into the ecological significance and evolutionary strategies of this bacterium within its natural habitat.

Taxonomy

KingdomThermotogati
PhylumThermotogota
ClassThermotogae
OrderKosmotogales
FamilyKosmotogaceae
GenusMesotoga
SpeciesMesotoga sp. SC_NapDC
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Mesotoga sp. SC_NapDC NapDC_c556, whole genome shotgun sequence.

Gene Summary

Adenine Count

765744 bp

Thymine Count

770495 bp

Guanine Count

661624 bp

Cytosine Count

640843 bp

Genome Length

2839777 bp

Protein-coding Genes

2481 genes

Non-Coding Genes

46 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
aldolaseEU77_08610Not AvailableNegative1642435 - 164306122954.6
hypothetical proteinEU77_08620Not AvailableNegative1643729 - 164401910623.6
peptide methionine sulfoxide reductaseEU77_08625Not AvailableNegative1644076 - 164477726248.0
nicotinamidaseEU77_08635Not AvailableNegative1646146 - 164665118769.2
hypothetical proteinEU77_08640Not AvailableNegative1646657 - 164768539089.1
hypothetical proteinEU77_08645Not AvailableNegative1647729 - 164858030077.1
gtp-binding proteinEU77_08650Not AvailablePositive1648688 - 164952431638.1
coproporphyrinogen dehydrogenaseEU77_08655Not AvailableNegative1649494 - 165072947053.8
pyridine nucleotide-disulfide oxidoreductaseEU77_08660Not AvailablePositive1650823 - 165216948167.7
phosphoglyceromutaseEU77_08665Not AvailableNegative1652229 - 165297528548.0

Displaying genes 1501 – 1510 of 2527 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.