Halostagnicola sp. A56

aerobic

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Natrialbaceae

Genus

Halostagnicola

Description

Halostagnicola sp. A56 is a notable bacterium characterized by its single replicon, which suggests a streamlined genetic organization. This trait can be indicative of its adaptation to specific ecological niches, particularly those involving saline environments. The organism has been assigned the accession number JMIP00000000.2, which provides a reference for genomic data and facilitates further research into its genetic makeup and potential applications. The single replicon may allow for efficient replication and maintenance of essential genes, potentially contributing to its resilience in harsh conditions. In ecological terms, Halostagnicola sp. A56's adaptation to saline environments could suggest a role in biogeochemical cycles, particularly in salt marshes, saline lakes, or other high-salinity ecosystems. Such bacteria often participate in nutrient cycling, influencing the availability of elements like nitrogen or sulfur, which are crucial for the functioning of these ecosystems. Understanding the traits of Halostagnicola sp. A56 can provide insights into microbial diversity and the specific adaptations that allow life to thrive in extreme conditions. As researchers continue to explore its genomic characteristics, more information may emerge regarding its ecological roles and potential biotechnological applications.

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyNatrialbaceae
GenusHalostagnicola
SpeciesHalostagnicola sp. A56
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature37
Temperature rangeNot Available
Habitatsand of Elephant Beach, Havelock Island
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halostagnicola sp. A56 27, whole genome shotgun sequence.

Gene Summary

Adenine Count

623787 bp

Thymine Count

622868 bp

Guanine Count

966755 bp

Cytosine Count

965040 bp

Genome Length

3178490 bp

Protein-coding Genes

2718 genes

Non-Coding Genes

45 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
mrna surveillance protein pelotaEL22_22200Not AvailablePositive365758 - 36682539489.0
hypothetical proteinEL22_22205Not AvailablePositive366975 - 3671727420.47
hypothetical proteinEL22_22215Not AvailablePositive369123 - 37009435586.5
n(5),n(10)-methenyltetrahydromethanopterin cyclohydrolaseEL22_22220Not AvailablePositive370262 - 37119432760.6
hypothetical proteinEL22_22225Not AvailablePositive371226 - 37168117126.2
gtp-binding proteinEL22_22230Not AvailableNegative371741 - 37341459868.1
hypothetical proteinEL22_22235Not AvailablePositive373564 - 3737436381.51
orotidine 5'-phosphate decarboxylaseEL22_22240Not AvailableNegative373882 - 37468228694.4
methylglyoxal synthaseEL22_22245Not AvailablePositive374897 - 37527413613.2
acyl dehydrataseEL22_22250Not AvailablePositive375407 - 37585916886.4

Displaying genes 321 – 330 of 2763 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.