Halostagnicola sp. A56

aerobic

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Natrialbaceae

Genus

Halostagnicola

Description

Halostagnicola sp. A56 is a notable bacterium characterized by its single replicon, which suggests a streamlined genetic organization. This trait can be indicative of its adaptation to specific ecological niches, particularly those involving saline environments. The organism has been assigned the accession number JMIP00000000.2, which provides a reference for genomic data and facilitates further research into its genetic makeup and potential applications. The single replicon may allow for efficient replication and maintenance of essential genes, potentially contributing to its resilience in harsh conditions. In ecological terms, Halostagnicola sp. A56's adaptation to saline environments could suggest a role in biogeochemical cycles, particularly in salt marshes, saline lakes, or other high-salinity ecosystems. Such bacteria often participate in nutrient cycling, influencing the availability of elements like nitrogen or sulfur, which are crucial for the functioning of these ecosystems. Understanding the traits of Halostagnicola sp. A56 can provide insights into microbial diversity and the specific adaptations that allow life to thrive in extreme conditions. As researchers continue to explore its genomic characteristics, more information may emerge regarding its ecological roles and potential biotechnological applications.

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyNatrialbaceae
GenusHalostagnicola
SpeciesHalostagnicola sp. A56
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature37
Temperature rangeNot Available
Habitatsand of Elephant Beach, Havelock Island
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halostagnicola sp. A56 27, whole genome shotgun sequence.

Gene Summary

Adenine Count

623787 bp

Thymine Count

622868 bp

Guanine Count

966755 bp

Cytosine Count

965040 bp

Genome Length

3178490 bp

Protein-coding Genes

2718 genes

Non-Coding Genes

45 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
cold-shock proteinEL22_04795Not AvailablePositive1985968 - 19861747422.21
sugar-specific transcriptional regulator trmbEL22_04800Not AvailablePositive1986433 - 198696019936.0
hypothetical proteinEL22_04805Not AvailablePositive1986961 - 198741017231.9
proteasome subunit betaEL22_04810Not AvailableNegative1987566 - 198829725577.5
hypothetical proteinEL22_04820Not AvailablePositive1989148 - 198950712668.7
transcriptional regulatorEL22_04825Not AvailablePositive1989567 - 199010619475.8
tena family transcriptional regulatorEL22_04830Not AvailablePositive1990213 - 199087225576.7
urea abc transporter atp-binding proteinEL22_04835Not AvailableNegative1990922 - 199162025397.0
branched-chain amino acid abc transporter atp-binding proteinEL22_04840Not AvailableNegative1991620 - 199239928387.3
urea abc transporter permeaseEL22_04845Not AvailableNegative1992399 - 199351738551.0

Displaying genes 1801 – 1810 of 2763 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.