Pseudomonas capeferrum str. WCS358

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas capeferrum strain WCS358 is characterized by having a single replicon, which is a notable trait indicating its genomic structure. The strain's genetic material is recorded under the accession number JMIT00000000.1, providing a reference for researchers interested in its genomic analysis and characteristics. As a member of the Pseudomonas genus, Pseudomonas capeferrum likely exhibits traits typical of this group, such as metabolic diversity and the ability to thrive in various environments. Pseudomonas species are known for their role in biogeochemical cycles and their interactions in diverse ecological niches, which may include soil and aquatic ecosystems. The presence of a single replicon in Pseudomonas capeferrum strain WCS358 may suggest a streamlined genomic organization, potentially allowing for efficient replication and adaptation to its environmental conditions. This trait may play a role in the strain's ecological fitness, allowing it to respond effectively to changes in its habitat. In summary, Pseudomonas capeferrum strain WCS358, with its single replicon and documented genomic data, represents a distinct member of the Pseudomonas genus. Its potential ecological roles and adaptations underscore the importance of further studying such strains to understand their contributions to environmental processes and microbial diversity.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas capeferrum
StrainWCS358

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas capeferrum str. WCS358
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas capeferrum strain WCS358 WCS358-Sc8, whole genome

Gene Summary

Adenine Count

1123583 bp

Thymine Count

1092830 bp

Guanine Count

1825176 bp

Cytosine Count

1895489 bp

Genome Length

5940443 bp

Protein-coding Genes

5055 genes

Non-Coding Genes

236 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
molecular chaperone dnakPC358_18110Not AvailablePositive3982823 - 398326917124.3
glutamyl-q trna(asp) ligasePC358_18115Not AvailablePositive3983333 - 398422033001.5
mfs transporterPC358_18120Not AvailablePositive3984522 - 39846986991.78
atpasePC358_18125Not AvailablePositive3984682 - 3987657109135.0
fis family transcriptional regulatorPC358_18130Not AvailablePositive3987662 - 398910152205.0
poly(a) polymerasePC358_18135Not AvailablePositive3990092 - 399148052874.1
2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinasePC358_18140Not AvailablePositive3991477 - 399195617435.0
3-methyl-2-oxobutanoate hydroxymethyltransferasePC358_18145Not AvailablePositive3992203 - 399300327725.8
pantoate--beta-alanine ligasePC358_18150Not AvailablePositive3993000 - 399386331085.5
glucose-6-phosphate isomerasePC358_18155Not AvailablePositive3994059 - 399572361570.5

Displaying genes 3551 – 3560 of 5291 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.